Miyakogusa Predicted Gene
- Lj3g3v2669620.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2669620.1 tr|G5DVZ7|G5DVZ7_SILLA Calmodulin binding protein
(Fragment) OS=Silene latifolia PE=2 SV=1,36.88,4e-18,seg,NULL; IQ,IQ
motif, EF-hand binding site; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; Short ,CUFF.44365.1
(1221 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV417757 homologue to UniRef100_Q2HVD0 Cluster: IQ calm... 494 e-139
gnl|LJGI|AV767031 347 1e-94
gnl|LJGI|FS342602 similar to UniRef100_A7P4K7 Cluster: Chromosom... 70 4e-11
gnl|LJGI|TC64283 similar to UniRef100_Q2HVD0 Cluster: IQ calmodu... 66 6e-10
gnl|LJGI|GO029834 homologue to UniRef100_Q2HVD0 Cluster: IQ calm... 54 2e-06
>gnl|LJGI|AV417757 homologue to UniRef100_Q2HVD0 Cluster: IQ calmodulin-binding
region; n=1; Medicago truncatula|Rep: IQ
calmodulin-binding region - Medicago truncatula (Barrel
medic), partial (19%)
Length = 253
Score = 494 bits (249), Expect = e-139
Identities = 252/253 (99%)
Strand = Plus / Plus
Query: 244 ttcatggtgatcaagcaggaatgggctgctattcgaatccagactctgtttcgtggcttc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcatggtgatcaagcaggaatgggctgctattcgaatccagactctgtttcgtggcttc 60
Query: 304 ttggcaagacgggctttgagggcactgagggcagtggtgaggctgcaagctatttttcgt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttggcaagacgggctttgagggcactgagggcagtggtgaggctgcaagctatttttcgt 120
Query: 364 ggccggctagtgagaaagcaagcagctgttaccctaaggtgcatgcaggctcttgtgcgg 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggccggctagtgagaaagcaagcagctgttaccctaaggtgcatgcaggctcttgtgcga 180
Query: 424 gttcaagcacgtgtcaaggcaaggaatgtgagcaagtctccacaagggaaagctgtgcag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttcaagcacgtgtcaaggcaaggaatgtgagcaagtctccacaagggaaagctgtgcag 240
Query: 484 aaatcgttgaagg 496
|||||||||||||
Sbjct: 241 aaatcgttgaagg 253
>gnl|LJGI|AV767031
Length = 460
Score = 347 bits (175), Expect = 1e-94
Identities = 193/199 (96%)
Strand = Plus / Minus
Query: 1023 agcttgtagatgttctcagaaaacaaagagaatatttttggatgattgtccatctcgaag 1082
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 460 agcttgtagatgttctcagaaaacaaaaagaatatttttggatgattgtccatctcgaag 401
Query: 1083 cacgagaaaagactttctaaatggagatactagaagcatttctggttcctatccttcata 1142
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cacgagaaaagactttcttaatggagatactagaagcatttctggttcctatccttcata 341
Query: 1143 taatatatggaaggatctctatgcaacacctttaagggcaagttatcataagagatacac 1202
||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 340 taaaataaggaaggatctctatgcaacccctttaagggcaagttatcataagagataccc 281
Query: 1203 aatggatgataagtagatt 1221
|||||||||||||||||||
Sbjct: 280 aatggatgataagtagatt 262
>gnl|LJGI|FS342602 similar to UniRef100_A7P4K7 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 701
Score = 69.9 bits (35), Expect = 4e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 295 cgtggcttcttggcaagacgggctttgagggcactgagggcagtggtgaggctgcaagc 353
|||| ||||||||||||| ||||||||||||| ||| ||||||||||||||| |||||
Sbjct: 257 cgtgccttcttggcaagaagggctttgagggctttgaaggcagtggtgaggcttcaagc 315
>gnl|LJGI|TC64283 similar to UniRef100_Q2HVD0 Cluster: IQ calmodulin-binding region;
n=1; Medicago truncatula|Rep: IQ calmodulin-binding
region - Medicago truncatula (Barrel medic), partial
(20%)
Length = 859
Score = 65.9 bits (33), Expect = 6e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 548 gtgctagtccaaattccagagcaactaaaccattgactcctctcaagcatcgcagcctag 607
||||||||||||| |||| ||| || ||| || |||||| ||||||||||| |||| |||
Sbjct: 44 gtgctagtccaaactccaaagccacaaaatcagtgactcttctcaagcatcacagcatag 103
Query: 608 acaataagagctt 620
|||| ||||||||
Sbjct: 104 acaacaagagctt 116
Score = 54.0 bits (27), Expect = 2e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 922 ccatccaccaacactgttatggtggaagcaa 952
|||||||||||||||| ||||||||||||||
Sbjct: 346 ccatccaccaacactgctatggtggaagcaa 376
Score = 54.0 bits (27), Expect = 2e-06
Identities = 81/99 (81%)
Strand = Plus / Plus
Query: 1101 aaatggagatactagaagcatttctggttcctatccttcatataatatatggaaggatct 1160
||||||||||| ||||||| ||||||||| |||||||| ||| | |||||||||||
Sbjct: 513 aaatggagataacagaagcagttctggttctgatccttcagtgaatttgtggaaggatct 572
Query: 1161 ctatgcaacacctttaagggcaagttatcataagagata 1199
| | | |||||| |||||||||| ||||| ||| ||||
Sbjct: 573 ttgttctacacctctaagggcaaggtatcaaaagcgata 611
>gnl|LJGI|GO029834 homologue to UniRef100_Q2HVD0 Cluster: IQ calmodulin-binding region;
n=1; Medicago truncatula|Rep: IQ calmodulin-binding
region - Medicago truncatula (Barrel medic), partial (7%)
Length = 780
Score = 54.0 bits (27), Expect = 2e-06
Identities = 81/99 (81%)
Strand = Plus / Minus
Query: 1101 aaatggagatactagaagcatttctggttcctatccttcatataatatatggaaggatct 1160
||||||||||| ||||||| ||||||||| |||||||| ||| | |||||||||||
Sbjct: 476 aaatggagataacagaagcagttctggttctgatccttcagtgaatttgtggaaggatct 417
Query: 1161 ctatgcaacacctttaagggcaagttatcataagagata 1199
| | | |||||| |||||||||| ||||| ||| ||||
Sbjct: 416 ttgttctacacctctaagggcaaggtatcaaaagcgata 378
Score = 54.0 bits (27), Expect = 2e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 922 ccatccaccaacactgttatggtggaagcaa 952
|||||||||||||||| ||||||||||||||
Sbjct: 643 ccatccaccaacactgctatggtggaagcaa 613