Miyakogusa Predicted Gene
- Lj3g3v2668590.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2668590.1 tr|G7J6M1|G7J6M1_MEDTR Tir-nbs-lrr resistance
protein OS=Medicago truncatula GN=MTR_3g079780 PE=4 SV,38.35,1e-17,no
description,NULL; Toll/Interleukin receptor TIR
domain,Toll/interleukin-1 receptor homology (TIR),CUFF.44393.1
(612 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS332780 weakly similar to UniRef100_A7QGF1 Cluster: Ch... 973 0.0
gnl|LJGI|DC593322 similar to UniRef100_A7QGH9 Cluster: Chromosom... 105 3e-22
gnl|LJGI|GO010485 homologue to UniRef100_A7QBH1 Cluster: Chromos... 60 2e-08
>gnl|LJGI|FS332780 weakly similar to UniRef100_A7QGF1 Cluster: Chromosome undetermined
scaffold_92, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_92, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (16%)
Length = 511
Score = 973 bits (491), Expect = 0.0
Identities = 506/511 (99%)
Strand = Plus / Plus
Query: 75 gtcttcatcttcttcccaccgcgtccctctcaaaaagtacgatgtgtttattagctttag 134
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 gtcttcatcttcttcccaccgcgtccctctcgaaaagtacgatgtgtttattagctttag 60
Query: 135 gggtgaggacacgagagataacttcgctaggcctctctatactgctctcacaaaggagaa 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gggtgaggacacgagagataacttcgctaggcctctctatactgctctcacaaaggagaa 120
Query: 195 gattgaaacctacatagattataagcttgaaagaggagatgatatttggccaggacttgt 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gattgaaacctacatagattataagcttgaaagaggagatgatatttggccaggacttgt 180
Query: 255 aaaagcaatcaaggactctgtgatgtccatcgttgtgttctcagaaagatacgcaacttc 314
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 181 aaaagcaatcaaggactctgtgatgtccatcgttgtgttctcggaaagatacgcaacttc 240
Query: 315 aaggtggtgtttgaatgaactcgcccaaataatgaagtgcagaagttatgagggacaggt 374
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 241 aaggtggtgtttgaatgaactcgcccaaataatgaagtgcataagttatgagggacaggt 300
Query: 375 tgttcttccactgttctacaaaacaaacccaacagacgtgcggcaccaaacagggagtta 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgttcttccactgttctacaaaacaaacccaacagacgtgcggcaccaaacagggagtta 360
Query: 435 caagaaaccatttgaagatcattatcgagccggtcgtgacgacgaagaaaaggtggatag 494
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 361 caagaaaccatttgaagatcattatcgagccggtcgtgacgacaaagaaaaggtggatag 420
Query: 495 ttggagagctgctctcaatcacgcagccaatatatctggatgggagtcaactacccacaa 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttggagagctgctctcaatcacgcagccaatatatctggatgggagtcaactacccacaa 480
Query: 555 ggacgattctcaattcataaaggaaattgtc 585
||||||||||||||||||||||||||||||
Sbjct: 481 tgacgattctcaattcataaaggaaattgtc 511
>gnl|LJGI|DC593322 similar to UniRef100_A7QGH9 Cluster: Chromosome undetermined
scaffold_92, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_92, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (21%)
Length = 591
Score = 105 bits (53), Expect = 3e-22
Identities = 89/101 (88%)
Strand = Plus / Plus
Query: 487 gtggatagttggagagctgctctcaatcacgcagccaatatatctggatgggagtcaact 546
|||| ||| ||||||||||||||| | | ||||||||||||||||||||||| |||| |
Sbjct: 55 gtgggtaggtggagagctgctctctctgaagcagccaatatatctggatgggactcaagt 114
Query: 547 acccacaaggacgattctcaattcataaaggaaattgtcaa 587
||||||||||||||||||||| ||||| || | ||||||||
Sbjct: 115 acccacaaggacgattctcaagtcatacagaacattgtcaa 155
>gnl|LJGI|GO010485 homologue to UniRef100_A7QBH1 Cluster: Chromosome chr13
scaffold_74, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_74, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 774
Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 525 tatatctggatgggagtcaactacccacaa 554
||||||||||||||||||||||||||||||
Sbjct: 2 tatatctggatgggagtcaactacccacaa 31