Miyakogusa Predicted Gene

Lj3g3v2666510.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2666510.1 Non Chatacterized Hit- tr|K4BMX8|K4BMX8_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,42.37,7e-19,
,CUFF.44362.1
         (378 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78848 homologue to UniRef100_A7P6M7 Cluster: Chromoso...   100   1e-20

>gnl|LJGI|TC78848 homologue to UniRef100_A7P6M7 Cluster: Chromosome chr9 scaffold_7,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr9 scaffold_7, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (72%)
          Length = 1233

 Score = 99.6 bits (50), Expect = 1e-20
 Identities = 68/74 (91%)
 Strand = Plus / Plus

                                                                        
Query: 301  catttgggcatccagtatgcaaattatgaacttgagagctggaaatgcaagtgtggccct 360
            |||||||| |||||||||||||| ||||| | |||||||||||||||||||||||| |||
Sbjct: 1006 catttggggatccagtatgcaaactatgagcctgagagctggaaatgcaagtgtggtcct 1065

                          
Query: 361  tccttctacagccc 374
            ||||| ||||||||
Sbjct: 1066 tccttttacagccc 1079



 Score = 63.9 bits (32), Expect = 7e-10
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                       
Query: 216 aatagggtcaagtccaccaggctgtgagcataagtgctatggctgtgttccatgtgaagc 275
           ||||||||| ||||||||| |||||||||| ||||| ||||| ||   ||| ||||||||
Sbjct: 897 aatagggtctagtccaccaagctgtgagcacaagtgttatggttgcactccttgtgaagc 956

                       
Query: 276 catccaagtacc 287
           ||| ||||||||
Sbjct: 957 cattcaagtacc 968