Miyakogusa Predicted Gene
- Lj3g3v2666480.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2666480.1 tr|Q9MAZ9|Q9MAZ9_SOYBN Nonclathrin coat protein
zeta1-COP OS=Glycine max GN=copz1 PE=2 SV=1,95,0,no description,NULL;
Clat_adaptor_s,AP complex, mu/sigma subunit; seg,NULL; SUBFAMILY NOT
NAMED,NULL,CUFF.44554.1
(543 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59095 homologue to UniRef100_Q9MAZ9 Cluster: Nonclath... 1076 0.0
gnl|LJGI|AU240137 similar to UniRef100_Q5QQ32 Cluster: Coatomer ... 559 e-159
gnl|LJGI|TC82502 similar to UniRef100_A7QNP4 Cluster: Chromosome... 161 6e-39
gnl|LJGI|TC63750 homologue to UniRef100_Q9MAZ1 Cluster: Nonclath... 86 3e-16
gnl|LJGI|TC62513 homologue to UniRef100_Q9MAZ1 Cluster: Nonclath... 86 3e-16
>gnl|LJGI|TC59095 homologue to UniRef100_Q9MAZ9 Cluster: Nonclathrin coat protein
zeta1-COP; n=1; Glycine max|Rep: Nonclathrin coat
protein zeta1-COP - Glycine max (Soybean), complete
Length = 822
Score = 1076 bits (543), Expect = 0.0
Identities = 543/543 (100%)
Strand = Plus / Plus
Query: 1 atggcatcgaatggccagtgtccttcgataaaaaatattcttcttttagattctgaaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 atggcatcgaatggccagtgtccttcgataaaaaatattcttcttttagattctgaaggg 139
Query: 61 aagcgtgtggcggtcaagtattactcagatgactggccaacaaacaattcaaagttagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 aagcgtgtggcggtcaagtattactcagatgactggccaacaaacaattcaaagttagct 199
Query: 121 ttcgagaagtttgtattcagtaagactcttaagacaaatgctcggacagaagctgaggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ttcgagaagtttgtattcagtaagactcttaagacaaatgctcggacagaagctgaggta 259
Query: 181 acactacttgagaacaatatcattatttacaaatttgtgcaagacctgcatttctttgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 acactacttgagaacaatatcattatttacaaatttgtgcaagacctgcatttctttgtc 319
Query: 241 actggtggtgatgatgaaaatgaactcattttggcatcagttcttcaaggtttctttgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 actggtggtgatgatgaaaatgaactcattttggcatcagttcttcaaggtttctttgat 379
Query: 301 gcagtcacccttctgttgaggagcaatgttgacaaaagagaggcacttgagaatttggac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gcagtcacccttctgttgaggagcaatgttgacaaaagagaggcacttgagaatttggac 439
Query: 361 ctcattcttttatgtcttgacgagattgttgacggagggataatacttgaaacaaatgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctcattcttttatgtcttgacgagattgttgacggagggataatacttgaaacaaatgga 499
Query: 421 cctcttattgctgaaaaagtgacctcccatagcttggatgctgatgcccccttgtcagag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cctcttattgctgaaaaagtgacctcccatagcttggatgctgatgcccccttgtcagag 559
Query: 481 cagactctaactcaagcatgggctacagccagagaacatttgacaagaacccttttaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cagactctaactcaagcatgggctacagccagagaacatttgacaagaacccttttaaaa 619
Query: 541 tga 543
|||
Sbjct: 620 tga 622
>gnl|LJGI|AU240137 similar to UniRef100_Q5QQ32 Cluster: Coatomer zeta1 subunit; n=1;
Medicago truncatula|Rep: Coatomer zeta1 subunit -
Medicago truncatula (Barrel medic), partial (61%)
Length = 420
Score = 559 bits (282), Expect = e-159
Identities = 319/330 (96%), Gaps = 1/330 (0%)
Strand = Plus / Plus
Query: 1 atggcatcgaatggccagtgtccttcgataaaaaatattcttcttttagattctgaaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 atggcatcgaatggccagtgtccttcgataaaaaatattcttcttttagattctgaaggg 104
Query: 61 aagcgtgtggcggtcaagtattactcagatgactggccaacaaacaattcaaagttagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 aagcgtgtggcggtcaagtattactcagatgactggccaacaaacaattcaaagttagct 164
Query: 121 ttcgagaagtttgtattcagtaagactcttaagacaaatgctcggacagaagctgaggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 ttcgagaagtttgtattcagtaagactcttaagacaaatgctcggacagaagctgaggta 224
Query: 181 acactacttgagaacaatatcattatttacaaatttgtgcaagacctgcatttctttgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 225 acactacttgagaacaatatcattatttacaaatttgtgcaagacctgcatgtctttgtc 284
Query: 241 actggtggtgatgatga-aaatgaactcattttggcatcagttcttcaaggtttctttga 299
||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 285 actggtggtgatgatgatgaatgaactcatcttggcatcagtgcttcaaggtttctttga 344
Query: 300 tgcagtcacccttctgttgaggagcaatgt 329
||| ||||||| |||| || || ||||||
Sbjct: 345 tgctttcaccctactgtagacgaccaatgt 374
>gnl|LJGI|TC82502 similar to UniRef100_A7QNP4 Cluster: Chromosome undetermined
scaffold_133, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_133,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (44%)
Length = 1195
Score = 161 bits (81), Expect = 6e-39
Identities = 105/113 (92%)
Strand = Plus / Plus
Query: 277 tcagttcttcaaggtttctttgatgcagtcacccttctgttgaggagcaatgttgacaaa 336
|||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||
Sbjct: 324 tcagttcttcaaggtttctttgatgcagtcactcttctgttgaggaacaatgtcaacaaa 383
Query: 337 agagaggcacttgagaatttggacctcattcttttatgtcttgacgagattgt 389
||||||||||||||||| |||||||||||||||||||| | ||| ||||||||
Sbjct: 384 agagaggcacttgagaacttggacctcattcttttatgccctgatgagattgt 436
>gnl|LJGI|TC63750 homologue to UniRef100_Q9MAZ1 Cluster: Nonclathrin coat protein
zeta2-COP; n=1; Glycine max|Rep: Nonclathrin coat
protein zeta2-COP - Glycine max (Soybean), partial (98%)
Length = 837
Score = 85.7 bits (43), Expect = 3e-16
Identities = 172/215 (80%)
Strand = Plus / Plus
Query: 49 gattctgaagggaagcgtgtggcggtcaagtattactcagatgactggccaacaaacaat 108
|||||||| ||||| ||||||||||||||||||| ||| |||||||||||||| || | |
Sbjct: 107 gattctgatgggaaacgtgtggcggtcaagtatttctctgatgactggccaaccaatagt 166
Query: 109 tcaaagttagctttcgagaagtttgtattcagtaagactcttaagacaaatgctcggaca 168
|| || ||||| |||||| |||| |||| ||||||| ||||| ||||| || ||
Sbjct: 167 gcacaggaggcttttgagaagcttgtgttcaccaagactcagaagaccaatgcccgcacg 226
Query: 169 gaagctgaggtaacactacttgagaacaatatcattatttacaaatttgtgcaagacctg 228
||||| ||| ||||| | |||||||| | || || ||||||| ||||| ||||| ||
Sbjct: 227 gaagcggagataacaatgcttgagaattacattgttgtttacaagtttgtccaagatctt 286
Query: 229 catttctttgtcactggtggtgatgatgaaaatga 263
|| |||||||| || || ||||| || ||||||||
Sbjct: 287 cacttctttgttaccgggggtgacgaagaaaatga 321
Score = 54.0 bits (27), Expect = 9e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 481 cagactctaactcaagcatgggctacagccagagaacatttgacaagaacccttttaaaa 540
||||| ||||||||||||| ||| |||||||| |||||||| ||||| ||||| | |||
Sbjct: 539 cagacactaactcaagcattggccacagccagggaacattttgcaagatcccttcttaaa 598
Query: 541 tga 543
|||
Sbjct: 599 tga 601
>gnl|LJGI|TC62513 homologue to UniRef100_Q9MAZ1 Cluster: Nonclathrin coat protein
zeta2-COP; n=1; Glycine max|Rep: Nonclathrin coat
protein zeta2-COP - Glycine max (Soybean), partial (98%)
Length = 809
Score = 85.7 bits (43), Expect = 3e-16
Identities = 172/215 (80%)
Strand = Plus / Plus
Query: 49 gattctgaagggaagcgtgtggcggtcaagtattactcagatgactggccaacaaacaat 108
|||||||| ||||| ||||||||||||||||||| ||| |||||||||||||| || | |
Sbjct: 147 gattctgacgggaaacgtgtggcggtcaagtatttctctgatgactggccaaccaatagt 206
Query: 109 tcaaagttagctttcgagaagtttgtattcagtaagactcttaagacaaatgctcggaca 168
|| || ||||| |||||| |||| |||| ||||||| ||||| ||||| || ||
Sbjct: 207 gcacaggaggcttttgagaagcttgtgttcaccaagactcagaagaccaatgcccgcacg 266
Query: 169 gaagctgaggtaacactacttgagaacaatatcattatttacaaatttgtgcaagacctg 228
||||| ||| ||||| | |||||||| | || || ||||||| ||||| ||||| ||
Sbjct: 267 gaagcggagataacaatgcttgagaattacattgttgtttacaagtttgtccaagatctt 326
Query: 229 catttctttgtcactggtggtgatgatgaaaatga 263
|| |||||||| || || ||||| || ||||||||
Sbjct: 327 cacttctttgttaccgggggtgacgaagaaaatga 361
Score = 54.0 bits (27), Expect = 9e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 481 cagactctaactcaagcatgggctacagccagagaacatttgacaagaacccttttaaaa 540
||||| ||||||||||||| ||| |||||||| |||||||| ||||| ||||| | |||
Sbjct: 579 cagacactaactcaagcattggccacagccagggaacattttgcaagatcccttcttaaa 638
Query: 541 tga 543
|||
Sbjct: 639 tga 641