Miyakogusa Predicted Gene
- Lj3g3v2657800.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2657800.1 tr|E0WC41|E0WC41_SOYBN CCAAT-binding
transcription factor family protein OS=Glycine max GN=NF-YA1
PE,75.75,0,NFYA_HAP2_2,CCAAT-binding transcription factor, subunit B;
CBFB_NFYA,CCAAT-binding transcription fac,CUFF.44333.1
(915 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70895 similar to UniRef100_A7P6L4 Cluster: Chromosome... 704 0.0
gnl|LJGI|DC595966 184 6e-46
gnl|LJGI|TC57894 similar to UniRef100_O49915 Cluster: RAPB prote... 66 4e-10
>gnl|LJGI|TC70895 similar to UniRef100_A7P6L4 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 645
Score = 704 bits (355), Expect = 0.0
Identities = 364/367 (99%)
Strand = Plus / Plus
Query: 549 acatgcaatgaaaagagctagaggttctggcggacgtttcctgaacacaaaaaagctcca 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acatgcaatgaaaagagctagaggttctggcggacgtttcctgaacacaaaaaagctcca 60
Query: 609 agagtcaaagctcacttcaaagaaccatggctttggtgcgtccaattgtactcagttgaa 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agagtcaaagctcacttcaaagaaccatggctttggtgcgtccaattgtactcagttgaa 120
Query: 669 tctgagcggaaacatgtcagaatctgaggtcggtcgagtggaaaactacggagatggtgt 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tctgagcggaaacatgtcagaatctgaggtcggtcgagtggaaaactacggagatggtgt 180
Query: 729 ttccgcaaccacctgttctgatgttacaagtggatctaacagtgactgcatcctcaagca 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttccgcaaccacctgttctgatgttacaagtggatctaacagtgactgcatcctcaagca 240
Query: 789 acaggaattagagttcagactgtgtggttacccttctcatattggaagaaatatgcaggg 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acaggaattagagttcagactgtgtggttacccttctcatattggaagaaatatgcaggg 300
Query: 849 ttacgcggcaaacatgggtagtggtggtggtgcaaatcaacaccatctatcagttcttct 908
|||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 301 ttacgcggcaaacatgggtagtggtggtggtgggaatccacaccatctatcagttcttct 360
Query: 909 ctgaaaa 915
|||||||
Sbjct: 361 ctgaaaa 367
>gnl|LJGI|DC595966
Length = 474
Score = 184 bits (93), Expect = 6e-46
Identities = 96/97 (98%)
Strand = Plus / Plus
Query: 72 ttcttgttcaactcaatcaacagggcaatcttatccgaaagttggttcagcacaatcagg 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ttcttgttcaactcaatcaacagggcaatcttatccgaaagttggttcagcacaatcagg 437
Query: 132 tcaaatttctgttcagtatagcaattcttctgattgt 168
||||||||||| |||||||||||||||||||||||||
Sbjct: 438 tcaaatttctggtcagtatagcaattcttctgattgt 474
>gnl|LJGI|TC57894 similar to UniRef100_O49915 Cluster: RAPB protein; n=1; Oryza
sativa|Rep: RAPB protein - Oryza sativa (Rice), partial
(31%)
Length = 847
Score = 65.9 bits (33), Expect = 4e-10
Identities = 96/117 (82%)
Strand = Plus / Plus
Query: 423 acccatatatgtgaatgcaaagcagtaccatgctattctcaggcgcagacagtatcgtgc 482
|||||| ||||| ||||| ||||| ||||||| ||| || || | |||||| || ||
Sbjct: 340 acccatttatgtcaatgcgaagcaataccatggtatactgagaaggcgacagtcacgagc 399
Query: 483 aaagctcgaagcacagaacaaactcgccaaaaatcggaaaccatatcttcacgagtc 539
|||||| || ||||||||||||||| ||||| ||| || |||||||||||||||||
Sbjct: 400 aaagcttgaggcacagaacaaactcatcaaaagtcgtaagccatatcttcacgagtc 456