Miyakogusa Predicted Gene

Lj3g3v2645610.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2645610.2 Non Chatacterized Hit- tr|I1HJX4|I1HJX4_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,56.25,2e-18,seg,NULL; BRX,Brevis radix-like domain; REGULATOR OF
CHROMOSOME CONDENSATION-RELATED,NULL; REGULATOR,CUFF.44326.2
         (1107 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75086 similar to UniRef100_A7PE06 Cluster: Chromosome...    96   6e-19

>gnl|LJGI|TC75086 similar to UniRef100_A7PE06 Cluster: Chromosome chr11 scaffold_13,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_13, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (34%)
          Length = 787

 Score = 95.6 bits (48), Expect = 6e-19
 Identities = 93/108 (86%)
 Strand = Plus / Plus

                                                                       
Query: 475 gatctgaagaggatacggttcagccgtgaaatgttcaataaatggcaagcacagaggtgg 534
           ||||| ||| ||||||| ||||||||||| ||||| || ||||||||||| || || |||
Sbjct: 636 gatctcaagcggatacgcttcagccgtgagatgtttaacaaatggcaagctcaaagatgg 695

                                                           
Query: 535 tgggcagagaattacgacaaggtcatggagttgtacaatgttcaaagg 582
           |||| |||||| || ||||||||||||||  | |||||||||||||||
Sbjct: 696 tgggaagagaactatgacaaggtcatggaactttacaatgttcaaagg 743