Miyakogusa Predicted Gene

Lj3g3v2634530.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2634530.1 Non Chatacterized Hit- tr|A3AJ03|A3AJ03_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,62.16,7e-18,DUF1313,Protein of unknown function
DUF1313,CUFF.44318.1
         (347 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS329855 similar to UniRef100_A7PDZ7 Cluster: Chromosom...   688   0.0  
gnl|LJGI|TC60332 similar to UniRef100_A7PDZ7 Cluster: Chromosome...   688   0.0  
gnl|LJGI|GO011672 homologue to UniRef100_A7PDZ7 Cluster: Chromos...   123   8e-28
gnl|LJGI|TC61090 homologue to UniRef100_A7PDZ7 Cluster: Chromoso...   117   5e-26
gnl|LJGI|TC59846 similar to UniRef100_A7PDZ7 Cluster: Chromosome...    66   2e-10

>gnl|LJGI|FS329855 similar to UniRef100_A7PDZ7 Cluster: Chromosome chr11 scaffold_13,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_13, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (98%)
          Length = 782

 Score =  688 bits (347), Expect = 0.0
 Identities = 347/347 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggatggtgatatatttggagaactaggtaatacaagtcaagtagatagcagagttatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 atggatggtgatatatttggagaactaggtaatacaagtcaagtagatagcagagttatg 327

                                                                       
Query: 61  caggtatttcagaagagcttattgcaagcccaagatattttgaatcagaaccgggtgctg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 caggtatttcagaagagcttattgcaagcccaagatattttgaatcagaaccgggtgctg 387

                                                                       
Query: 121 atcaatgagataaaccaaaatcatgagtccaagatgcctgataatctgagtcgaaatgtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 atcaatgagataaaccaaaatcatgagtccaagatgcctgataatctgagtcgaaatgtg 447

                                                                       
Query: 181 ggtttgattaaggagctcaatagcaacatcagaagggtggttgatctctatgctgatatc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ggtttgattaaggagctcaatagcaacatcagaagggtggttgatctctatgctgatatc 507

                                                                       
Query: 241 tctagttcttttaccaagtcccaggaagcttcatctgaaggggactccagtgggactctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tctagttcttttaccaagtcccaggaagcttcatctgaaggggactccagtgggactctg 567

                                                          
Query: 301 aagtctgatggaaaagtcaatcagaagagaattagatccggctaata 347
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 aagtctgatggaaaagtcaatcagaagagaattagatccggctaata 614


>gnl|LJGI|TC60332 similar to UniRef100_A7PDZ7 Cluster: Chromosome chr11 scaffold_13,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_13, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (98%)
          Length = 901

 Score =  688 bits (347), Expect = 0.0
 Identities = 347/347 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggatggtgatatatttggagaactaggtaatacaagtcaagtagatagcagagttatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 atggatggtgatatatttggagaactaggtaatacaagtcaagtagatagcagagttatg 272

                                                                       
Query: 61  caggtatttcagaagagcttattgcaagcccaagatattttgaatcagaaccgggtgctg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 caggtatttcagaagagcttattgcaagcccaagatattttgaatcagaaccgggtgctg 332

                                                                       
Query: 121 atcaatgagataaaccaaaatcatgagtccaagatgcctgataatctgagtcgaaatgtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 atcaatgagataaaccaaaatcatgagtccaagatgcctgataatctgagtcgaaatgtg 392

                                                                       
Query: 181 ggtttgattaaggagctcaatagcaacatcagaagggtggttgatctctatgctgatatc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ggtttgattaaggagctcaatagcaacatcagaagggtggttgatctctatgctgatatc 452

                                                                       
Query: 241 tctagttcttttaccaagtcccaggaagcttcatctgaaggggactccagtgggactctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tctagttcttttaccaagtcccaggaagcttcatctgaaggggactccagtgggactctg 512

                                                          
Query: 301 aagtctgatggaaaagtcaatcagaagagaattagatccggctaata 347
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 aagtctgatggaaaagtcaatcagaagagaattagatccggctaata 559


>gnl|LJGI|GO011672 homologue to UniRef100_A7PDZ7 Cluster: Chromosome chr11
           scaffold_13, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (93%)
          Length = 622

 Score =  123 bits (62), Expect = 8e-28
 Identities = 155/186 (83%)
 Strand = Plus / Plus

                                                                       
Query: 104 atcagaaccgggtgctgatcaatgagataaaccaaaatcatgagtccaagatgcctgata 163
           ||||||||||||| || ||||||||||||||||| ||||||||||| ||  | ||||| |
Sbjct: 303 atcagaaccgggtactcatcaatgagataaaccagaatcatgagtctaaagtccctgaca 362

                                                                       
Query: 164 atctgagtcgaaatgtgggtttgattaaggagctcaatagcaacatcagaagggtggttg 223
           |||| ||| ||||||| ||  | |||| ||||||||||| |||||||||||| |||||||
Sbjct: 363 atctcagtagaaatgttggacttattagggagctcaataacaacatcagaagagtggttg 422

                                                                       
Query: 224 atctctatgctgatatctctagttcttttaccaagtcccaggaagcttcatctgaagggg 283
           | || ||||| ||| | || ||||| |||||||| |||  ||| ||||| ||||| ||||
Sbjct: 423 acctttatgcggatctttcaagttcctttaccaaatccatggatgcttcttctgaggggg 482

                 
Query: 284 actcca 289
           | ||||
Sbjct: 483 attcca 488


>gnl|LJGI|TC61090 homologue to UniRef100_A7PDZ7 Cluster: Chromosome chr11
           scaffold_13, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (93%)
          Length = 808

 Score =  117 bits (59), Expect = 5e-26
 Identities = 146/175 (83%)
 Strand = Plus / Plus

                                                                       
Query: 104 atcagaaccgggtgctgatcaatgagataaaccaaaatcatgagtccaagatgcctgata 163
           ||||||||||||| || ||||||||||||||||| ||||||||||| ||  | ||||| |
Sbjct: 277 atcagaaccgggtactcatcaatgagataaaccagaatcatgagtctaaagtccctgaca 336

                                                                       
Query: 164 atctgagtcgaaatgtgggtttgattaaggagctcaatagcaacatcagaagggtggttg 223
           |||| ||| ||||||| ||  | |||| ||||||||||| |||||||||||| |||||||
Sbjct: 337 atctcagtagaaatgttggacttattagggagctcaataacaacatcagaagagtggttg 396

                                                                  
Query: 224 atctctatgctgatatctctagttcttttaccaagtcccaggaagcttcatctga 278
           | || ||||| ||| | || ||||| |||||||| |||  ||| ||||| |||||
Sbjct: 397 acctttatgcggatctttcaagttcctttaccaaatccatggatgcttcttctga 451


>gnl|LJGI|TC59846 similar to UniRef100_A7PDZ7 Cluster: Chromosome chr11 scaffold_13,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_13, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (98%)
          Length = 1120

 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 99/121 (81%)
 Strand = Plus / Plus

                                                                       
Query: 104 atcagaaccgggtgctgatcaatgagataaaccaaaatcatgagtccaagatgcctgata 163
           |||||||| |||| || ||||||||||||||||| ||||||||||| ||| | ||||| |
Sbjct: 522 atcagaacagggttctcatcaatgagataaaccagaatcatgagtctaaggtccctgaca 581

                                                                       
Query: 164 atctgagtcgaaatgtgggtttgattaaggagctcaatagcaacatcagaagggtggttg 223
           | || |   | ||||||||  | ||||| |||||||| | |||||| ||||| |||||||
Sbjct: 582 accttaacaggaatgtgggacttattaaagagctcaacaacaacataagaagagtggttg 641

            
Query: 224 a 224
           |
Sbjct: 642 a 642