Miyakogusa Predicted Gene

Lj3g3v2633520.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2633520.2 Non Chatacterized Hit- tr|A5BNC8|A5BNC8_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,70,0,seg,NULL;
TRNA-SPLICING ENDONUCLEASE POSITIVE EFFECTOR-RELATED,Probable helicase
MAGATAMA 3; DNA2/NA,CUFF.44340.2
         (4173 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP074912 similar to UniRef100_A7NV11 Cluster: Chromosom...   874   0.0  
gnl|LJGI|GO026238                                                     650   0.0  

>gnl|LJGI|BP074912 similar to UniRef100_A7NV11 Cluster: Chromosome chr18 scaffold_1,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr18 scaffold_1, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (18%)
          Length = 506

 Score =  874 bits (441), Expect = 0.0
 Identities = 477/489 (97%)
 Strand = Plus / Plus

                                                                        
Query: 1684 cccaggcctggatctgtcagagccaagcagaacagttcatctttagctcaggatgatagc 1743
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18   cccaggtctggatctgtcagagccaagcagaacagttcatctttagctcaggatgatagc 77

                                                                        
Query: 1744 gaatcagaaatcactggacgtgtggtgggtacagttaggcgacacatccctcttgatacc 1803
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78   gaatcagaagtcactggacgtgtggtgggtacagttaggcgacacatccctcttgatacc 137

                                                                        
Query: 1804 cgggatcctcctggtgcaattctccattactatgttggggactcctatgatcctagcagg 1863
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 138  cgggatcctcctggtgcaattctccattactatgttggggactcctataatcctagcagg 197

                                                                        
Query: 1864 gttgatgatgatcatattgtaagaaaacttcaaattggaagcatatggtacctctcagtg 1923
            ||||||||||||||||| ||||||||||||  || ||||||||||||||||||||||| |
Sbjct: 198  gttgatgatgatcatatagtaagaaaacttgcaaatggaagcatatggtacctctcaggg 257

                                                                        
Query: 1924 cttggatctctagctacaacgcagagggagtatattgctcttcacgcatttcgtcgctta 1983
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 258  cttggatctctagctacaaggcagagggagtatattgctcttcacgcatttcgtcgctta 317

                                                                        
Query: 1984 aattcgcagatgcaaactgcaatccttcagcctagtcctgaacacttcccaaaatatgag 2043
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318  aattcgcagatgcaaactgcaatccttcagcctagtcctgaacacttcccaaaatatgag 377

                                                                        
Query: 2044 caacaggccccagccatgcctgaatgcttcacgccaaactttgttgaatatctgcacaga 2103
            |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 378  caacaggccccagccatgcctgaatgcttcacgccaaagttggttgaatatctgcacaga 437

                                                                        
Query: 2104 accttcaatgaaccccagttagcagcaatccaatgggcagctatgcatacagctgctggt 2163
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 438  accttcaatgaaccccagttagcagcaatccaatgggcagctatgcatacaggtgctggt 497

                     
Query: 2164 actagtggg 2172
            |||||||||
Sbjct: 498  actagtggg 506


>gnl|LJGI|GO026238 
          Length = 328

 Score =  650 bits (328), Expect = 0.0
 Identities = 328/328 (100%)
 Strand = Plus / Plus

                                                                        
Query: 3060 ccaagccagtgaggtgggagttctgcctcccctctctcttggtgcagcacggtgtgttct 3119
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ccaagccagtgaggtgggagttctgcctcccctctctcttggtgcagcacggtgtgttct 60

                                                                        
Query: 3120 tgttggagatcctcagcagcttcctgctacagttatcagcaaggctgcaggaacattgat 3179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tgttggagatcctcagcagcttcctgctacagttatcagcaaggctgcaggaacattgat 120

                                                                        
Query: 3180 gtatagtaggagtctttttgaaaggttccaacaagcaggatgcccaacaatgttgttgtc 3239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gtatagtaggagtctttttgaaaggttccaacaagcaggatgcccaacaatgttgttgtc 180

                                                                        
Query: 3240 tgtgcaatatagaatgcatccccaaattcgggatttcccttctaggtacttttatcaggg 3299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  tgtgcaatatagaatgcatccccaaattcgggatttcccttctaggtacttttatcaggg 240

                                                                        
Query: 3300 gcgccttactgacagtgaaagtgtagttaaattgcctgatgaaccatactacaaggaccc 3359
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  gcgccttactgacagtgaaagtgtagttaaattgcctgatgaaccatactacaaggaccc 300

                                        
Query: 3360 tttacttagaccttatttattctatgat 3387
            ||||||||||||||||||||||||||||
Sbjct: 301  tttacttagaccttatttattctatgat 328