Miyakogusa Predicted Gene

Lj3g3v2576200.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2576200.1 tr|G7L8C5|G7L8C5_MEDTR ABC transporter B family
member OS=Medicago truncatula GN=MTR_8g022270 PE=3 S,81.05,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; ABC transporter
transmembrane region,ABC ,CUFF.44231.1
         (4377 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP055390 similar to UniRef100_A7QER8 Cluster: Chromosom...    62   3e-08
gnl|LJGI|AV776921 similar to UniRef100_A7PC62 Cluster: Chromosom...    54   8e-06

>gnl|LJGI|BP055390 similar to UniRef100_A7QER8 Cluster: Chromosome chr16 scaffold_86,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr16 scaffold_86, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (7%)
          Length = 473

 Score = 61.9 bits (31), Expect = 3e-08
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                           
Query: 4159 caattatcaggtgggcagaaacaaagaattgcaatagcaagggccat 4205
            ||||||||||| || |||||||| ||||||||||||||||| |||||
Sbjct: 228  caattatcagggggtcagaaacagagaattgcaatagcaagagccat 274


>gnl|LJGI|AV776921 similar to UniRef100_A7PC62 Cluster: Chromosome chr2 scaffold_11,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr2 scaffold_11, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (49%)
          Length = 418

 Score = 54.0 bits (27), Expect = 8e-06
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                       
Query: 4132 gaaacccaggttggtgaaagtggggttcaattatcaggtgggcagaaacaaagaattgc 4190
            ||||| ||||||||||| || ||| | ||| |||||||||||||||| ||||| |||||
Sbjct: 360  gaaactcaggttggtgagagagggatacaactatcaggtgggcagaagcaaaggattgc 418