Miyakogusa Predicted Gene

Lj3g3v2575910.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2575910.2 Non Chatacterized Hit- tr|D8R5Y8|D8R5Y8_SELML
Putative uncharacterized protein OS=Selaginella
moelle,43.82,0.000000000000007,39S RIBOSOMAL PROTEIN L43,NULL;
L51_S25_CI-B8,Ribosomal protein/NADH dehydrogenase domain;
Thioredox,CUFF.44201.2
         (273 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64925                                                      541   e-154
gnl|LJGI|TC69890 weakly similar to UniRef100_A9S2L6 Cluster: Pre...   438   e-123

>gnl|LJGI|TC64925 
          Length = 689

 Score =  541 bits (273), Expect = e-154
 Identities = 273/273 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtcgcatttgccagaattcaaggagaagaatcctcaattagaggtggtcactgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 atggagtcgcatttgccagaattcaaggagaagaatcctcaattagaggtggtcactgaa 246

                                                                       
Query: 61  atgattcgtggtcagcatccacatctgaagggtttttatgagaacaaaaaccaacgagta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 atgattcgtggtcagcatccacatctgaagggtttttatgagaacaaaaaccaacgagta 306

                                                                       
Query: 121 gtatgtgttaagaatttggatccggaggacatccttctgcaagcaaccaggctaaggaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gtatgtgttaagaatttggatccggaggacatccttctgcaagcaaccaggctaaggaat 366

                                                                       
Query: 181 gcattgggaaggaaggtaatcaaactgaggacaagacacgtaaccaaacaccctagtgtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gcattgggaaggaaggtaatcaaactgaggacaagacacgtaaccaaacaccctagtgtg 426

                                            
Query: 241 caaggtacatggacaactgccgtgaaatattaa 273
           |||||||||||||||||||||||||||||||||
Sbjct: 427 caaggtacatggacaactgccgtgaaatattaa 459


>gnl|LJGI|TC69890 weakly similar to UniRef100_A9S2L6 Cluster: Predicted protein; n=1;
           Physcomitrella patens subsp. patens|Rep: Predicted
           protein - Physcomitrella patens subsp. patens, partial
           (61%)
          Length = 722

 Score =  438 bits (221), Expect = e-123
 Identities = 260/273 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtcgcatttgccagaattcaaggagaagaatcctcaattagaggtggtcactgaa 60
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 222 atggagtcgcatttgccagagttcaaggagaagaatcctcaattagaggtggtcactgaa 281

                                                                       
Query: 61  atgattcgtggtcagcatccacatctgaagggtttttatgagaacaaaaaccaacgagta 120
           |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || 
Sbjct: 282 atgattcgtggtcagcatccacatctgaagggcttttatgagaacaaaaaccaacgggtg 341

                                                                       
Query: 121 gtatgtgttaagaatttggatccggaggacatccttctgcaagcaaccaggctaaggaat 180
            ||||||| |||||| ||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 342 atatgtgtaaagaatatggatccagaagacatccttctgcaagcaaccaggctaaggaat 401

                                                                       
Query: 181 gcattgggaaggaaggtaatcaaactgaggacaagacacgtaaccaaacaccctagtgtg 240
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 402 gcattgggaaggaaggtaatcaaactgaggacaagacacgtaactaaacaccctagtgtg 461

                                            
Query: 241 caaggtacatggacaactgccgtgaaatattaa 273
           ||||||||||||||||| || |||| |||||||
Sbjct: 462 caaggtacatggacaacagcagtgacatattaa 494