Miyakogusa Predicted Gene
- Lj3g3v2575730.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2575730.2 Non Chatacterized Hit- tr|I1MK64|I1MK64_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48463
PE,85.99,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
ARID,ARID/BRIGHT DNA-binding domain; ARID/BRIGHT DN,CUFF.44198.2
(2346 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74020 similar to UniRef100_A4Q7P3 Cluster: AT-rich in... 1786 0.0
gnl|LJGI|BP065219 similar to UniRef100_A4Q7P3 Cluster: AT-rich i... 1035 0.0
gnl|LJGI|TC79402 homologue to UniRef100_A4Q7P3 Cluster: AT-rich ... 347 2e-94
gnl|LJGI|TC71128 homologue to UniRef100_A7PDP9 Cluster: Chromoso... 260 4e-68
gnl|LJGI|TC72685 homologue to UniRef100_A7PDP9 Cluster: Chromoso... 222 8e-57
gnl|LJGI|FS352962 homologue to UniRef100_A7PDP9 Cluster: Chromos... 212 7e-54
gnl|LJGI|TC57586 weakly similar to UniRef100_A7PDP9 Cluster: Chr... 54 4e-06
>gnl|LJGI|TC74020 similar to UniRef100_A4Q7P3 Cluster: AT-rich interaction region; Zinc
finger, FYVE/PHD-type; n=1; Medicago truncatula|Rep:
AT-rich interaction region; Zinc finger, FYVE/PHD-type -
Medicago truncatula (Barrel medic), partial (39%)
Length = 1148
Score = 1786 bits (901), Expect = 0.0
Identities = 904/905 (99%)
Strand = Plus / Plus
Query: 1 atgtttcagtttcatcctcaaggagcttctaaacaaacatgtactctgcttgctgttact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 atgtttcagtttcatcctcaaggagcttctaaacaaacatgtactctgcttgctgttact 303
Query: 61 tgtgctgcaagttctgttgagcataaaccttctcatgaacagctcaaattccctttccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tgtgctgcaagttctgttgagcataaaccttctcatgaacagctcaaattccctttccct 363
Query: 121 gagttggtttctgcagggcgtcttgaggttcaaactctatgcgatccggagaaggagcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gagttggtttctgcagggcgtcttgaggttcaaactctatgcgatccggagaaggagcag 423
Query: 181 ttttgtaaagttctcgagacgtatcaacctaatattgtttacttacaagggaagcagcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ttttgtaaagttctcgagacgtatcaacctaatattgtttacttacaagggaagcagcta 483
Query: 241 ggaaatgggacagtaggttcactggtttggcaaggggtggaattatccacccccgaagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ggaaatgggacagtaggttcactggtttggcaaggggtggaattatccacccccgaagat 543
Query: 301 atagaagagcttttcggtcccacattgcccacggctgtttatttagaaattccagatgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 atagaagagcttttcggtcccacattgcccacggctgtttatttagaaattccagatgga 603
Query: 361 gaaagttttgcagaggctcttcatcttaagggaatcccatatgttatattttggaaaagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 gaaagttttgcagaggctcttcatcttaagggaatcccatatgttatattttggaaaagt 663
Query: 421 gttttttcttgttacgccgcctgccattttcgtcaagcatttctttcagtggtgcagagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gttttttcttgttacgccgcctgccattttcgtcaagcatttctttcagtggtgcagagt 723
Query: 481 tcatctacacatacatgggatgctttccaccttgcacgagcctcttttgaacttcactgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 tcatctacacatacatgggatgctttccaccttgcacgagcctcttttgaacttcactgt 783
Query: 541 gttcaaaataatcaagtacttcctactgacagcaatgatgatagtagagaggtgggacca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 gttcaaaataatcaagtacttcctactgacagcaatgatgatagtagagaggtgggacca 843
Query: 601 caccttcttggcaactgtctcaaaatcaatgttgaccctccggagatggttgaagaagat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 caccttcttggcaactgtctcaaaatcaatgttgaccctccggagatggttgaagaagat 903
Query: 661 gatgaagaaagttcctcaggcagtcttcctgctataaagatacatgatggtgaagtgaac 720
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 904 gatgaagaaagttcctcaggcagccttcctgctataaagatacatgatggtgaagtgaac 963
Query: 721 ttgagatttcttgtctgcggtgcaccttccactgttgatgagtcattgctgaaatctttg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 ttgagatttcttgtctgcggtgcaccttccactgttgatgagtcattgctgaaatctttg 1023
Query: 781 gaggatggactcaaagctcttttgaccattgaaatgcgtggttgcaagctccatggcaaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 gaggatggactcaaagctcttttgaccattgaaatgcgtggttgcaagctccatggcaaa 1083
Query: 841 tttagtgccccaccaccacctcttcaggcagctgctttttctcgcggagttgtgaccatg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 tttagtgccccaccaccacctcttcaggcagctgctttttctcgcggagttgtgaccatg 1143
Query: 901 cgttg 905
|||||
Sbjct: 1144 cgttg 1148
>gnl|LJGI|BP065219 similar to UniRef100_A4Q7P3 Cluster: AT-rich interaction region; Zinc
finger, FYVE/PHD-type; n=1; Medicago truncatula|Rep:
AT-rich interaction region; Zinc finger, FYVE/PHD-type -
Medicago truncatula (Barrel medic), partial (21%)
Length = 547
Score = 1035 bits (522), Expect = 0.0
Identities = 536/543 (98%)
Strand = Plus / Minus
Query: 994 catataaaaaacgagataattgagaagagtcaactagtacgtgcacaactcaacgacgag 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 catataaaaaacgagataattgagaagagtcaactagtacgtgcacaactcaacgacgag 488
Query: 1054 ggaaacaaacagaatatctctgaacctcgcaaatctgcatcgattgcttgtggagcaact 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ggaaacaaacagaatatctctgaacctcgcaaatctgcatcgattgcttgtggagcaact 428
Query: 1114 gtatttgaagttagcatgaagcttccccaatgggctttgcagattttgagacagctagca 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gtatttgaagttagcatgaagcttccccaatgggctttgcagattttgagacagctagca 368
Query: 1174 cctgatgtttcatatcgaagtttcgttgcacttggcatcgccagtattcaagggttgcca 1233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 cctgatgtttcatatcgaagtttcgttgcacttggcatcgccagtattcaagggttgcca 308
Query: 1234 atcgcttcttttgagaaagaagatgctgagcgcttacttttcttctatgaaagctgtgag 1293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 atcgcttcttttgagaaagaagatgctgagcgcttacttttcttctatgaaagctgtgag 248
Query: 1294 aaagatagctgtgtaaacaaaaacgatgttgttttcagcagtccaccagtttggttgaaa 1353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 aaagatagctgtgtaaacaaaaacgatgttgttttcagcagtccaccagtttggttgaaa 188
Query: 1354 ccaccccctcctacgagaaagaggtgtgcaccaagccagggggctagtcctggccttcat 1413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ccaccccctcctacgagaaagaggtgtgcaccaagccagggggctagtcctggccttcat 128
Query: 1414 gatggcgcctttgctgggcagggtgcttttcaaaaagtagatgaagaggaaaaaggtnnn 1473
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 gatggcgcctttgctgggcagggtgcttttcaaaaagtagatgaagaggaaaaaggtaaa 68
Query: 1474 nnnntggttaatgggatgagcacacccttaaatccagctaggcagagattaaaagtatct 1533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 aaaatggttaatgggatgagcacacccttaaatccagctaggcagagattaaaagtatct 8
Query: 1534 gca 1536
|||
Sbjct: 7 gca 5
>gnl|LJGI|TC79402 homologue to UniRef100_A4Q7P3 Cluster: AT-rich interaction region;
Zinc finger, FYVE/PHD-type; n=1; Medicago truncatula|Rep:
AT-rich interaction region; Zinc finger, FYVE/PHD-type -
Medicago truncatula (Barrel medic), partial (8%)
Length = 558
Score = 347 bits (175), Expect = 2e-94
Identities = 178/179 (99%)
Strand = Plus / Plus
Query: 2168 gtggtgagtgggctcactttggctgtgacagaaggcagggcctaggtgcatttaaggatt 2227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggtgagtgggctcactttggctgtgacagaaggcagggcctaggtgcatttaaggatt 60
Query: 2228 atgcaaaaacagatgggctagaatatatatgtcctcattgtagcattacaaatttcaaga 2287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgcaaaaacagatgggctagaatatatatgtcctcattgtagcattacaaatttcaaga 120
Query: 2288 aaaaacaaagtgttactaatgggtattctcatgggtcaatgtcatcacgacccctttga 2346
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 121 aaaaacaaagtgttactaatgggtattctcatgggtcaatgtcatcccgacccctttga 179
>gnl|LJGI|TC71128 homologue to UniRef100_A7PDP9 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 980
Score = 260 bits (131), Expect = 4e-68
Identities = 353/427 (82%)
Strand = Plus / Plus
Query: 1858 caaggagggcttactgagttccctgaggccatactcaatggaaaacgccttgatctctac 1917
||||| |||||| ||||||||||||| ||||| || |||| |||||||||||| || | |
Sbjct: 181 caaggtgggcttgctgagttccctgaagccattctgaatgcaaaacgccttgaccttttc 240
Query: 1918 aacttgtataaagaggtggttaccaggggaggatttcatgttggcaatggcatcaactgg 1977
||||| |||| ||||||||| | |||||||| ||||| ||||| ||||| ||||| |||
Sbjct: 241 aacttatatagagaggtggtgtcaaggggaggttttcacgttgggaatggtatcaattgg 300
Query: 1978 aagggacaaatcttttcaaagatgcgcaattacacaacaaccaatagaatgaccggagtt 2037
|| |||||| | || ||||||||||||||| ||||| || || | |||| | || |||
Sbjct: 301 aaaggacaagttttctcaaagatgcgcaatcacacactgacaaacaaaatggctggtgtt 360
Query: 2038 ggaaatacactcaaaagacattatgaaacctaccttctagaatacgaattagcacatgat 2097
|| ||||| ||||| ||||| || ||||| || ||| |||||||||| ||||| || |||
Sbjct: 361 ggcaatacgctcaagagacactacgaaacttatcttttagaatacgagttagctcacgat 420
Query: 2098 gatgttgatggagaatgctgcttgttgtgtcacagtagtgcagccggggattgggtgaat 2157
|| || ||||||||||||||||||||||||||||| |||||||| || || ||||||||
Sbjct: 421 gacgtagatggagaatgctgcttgttgtgtcacagcagtgcagcaggtgactgggtgaac 480
Query: 2158 tgtggcatatgtggtgagtgggctcactttggctgtgacagaaggcagggcctaggtgca 2217
|| || ||||||||||||||||| || ||||||||||| | ||||||| || || |||
Sbjct: 481 tgcggtatatgtggtgagtgggcacattttggctgtgatcggcggcagggactcggagca 540
Query: 2218 tttaaggattatgcaaaaacagatgggctagaatatatatgtcctcattgtagcattaca 2277
|||||||| ||||||||||| ||||| || || || | || |||||||| ||||| ||
Sbjct: 541 tttaaggactatgcaaaaactgatggactggagtacgtttgccctcattgcagcatatca 600
Query: 2278 aatttca 2284
|||||||
Sbjct: 601 aatttca 607
>gnl|LJGI|TC72685 homologue to UniRef100_A7PDP9 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 772
Score = 222 bits (112), Expect = 8e-57
Identities = 304/368 (82%)
Strand = Plus / Plus
Query: 1917 caacttgtataaagaggtggttaccaggggaggatttcatgttggcaatggcatcaactg 1976
|||||| |||| ||||||||| | |||||||| ||||| ||||| ||||| ||||| ||
Sbjct: 3 caacttatatagagaggtggtgtcaaggggaggttttcacgttgggaatggtatcaattg 62
Query: 1977 gaagggacaaatcttttcaaagatgcgcaattacacaacaaccaatagaatgaccggagt 2036
||| |||||| | || ||||||||||||||| ||||| || || | |||||| || ||
Sbjct: 63 gaaaggacaagttttctcaaagatgcgcaatcacacactgacaaacaaaatgactggtgt 122
Query: 2037 tggaaatacactcaaaagacattatgaaacctaccttctagaatacgaattagcacatga 2096
||| ||||| ||||| ||||| || ||||| || ||| |||||||||| ||||| || ||
Sbjct: 123 tggcaatacgctcaagagacactacgaaacttatcttttagaatacgagttagctcacga 182
Query: 2097 tgatgttgatggagaatgctgcttgttgtgtcacagtagtgcagccggggattgggtgaa 2156
||| || ||||||||||||||||||||||||||||| |||||||| || || ||||||||
Sbjct: 183 tgacgtagatggagaatgctgcttgttgtgtcacagcagtgcagcaggtgactgggtgaa 242
Query: 2157 ttgtggcatatgtggtgagtgggctcactttggctgtgacagaaggcagggcctaggtgc 2216
|| || ||||||||||||||||| || ||||||||||| | ||||||| || || ||
Sbjct: 243 ctgcggtatatgtggtgagtgggcacattttggctgtgatcggcggcagggactcggagc 302
Query: 2217 atttaaggattatgcaaaaacagatgggctagaatatatatgtcctcattgtagcattac 2276
||||||||| ||||||||||| ||||| || || || | || |||||||| ||||| |
Sbjct: 303 atttaaggactatgcaaaaactgatggactggagtacgtttgccctcattgcagcatatc 362
Query: 2277 aaatttca 2284
||||||||
Sbjct: 363 aaatttca 370
>gnl|LJGI|FS352962 homologue to UniRef100_A7PDP9 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 728
Score = 212 bits (107), Expect = 7e-54
Identities = 275/331 (83%)
Strand = Plus / Minus
Query: 1894 aatggaaaacgccttgatctctacaacttgtataaagaggtggttaccaggggaggattt 1953
|||| |||||||||||| || | |||||| |||| ||||||||| | |||||||| |||
Sbjct: 727 aatgcaaaacgccttgaccttttcaacttatatagagaggtggtgtcaaggggaggtttt 668
Query: 1954 catgttggcaatggcatcaactggaagggacaaatcttttcaaagatgcgcaattacaca 2013
|| ||||| ||||| ||||| ||||| |||||| | || ||||||||||||||| |||||
Sbjct: 667 cacgttgggaatggtatcaattggaaaggacaagttttctcaaagatgcgcaatcacaca 608
Query: 2014 acaaccaatagaatgaccggagttggaaatacactcaaaagacattatgaaacctacctt 2073
|| || | |||||| || ||||| ||||| ||||| ||||| || ||||| || |||
Sbjct: 607 ctgacaaacaaaatgactggtgttggcaatacgctcaagagacactacgaaacttatctt 548
Query: 2074 ctagaatacgaattagcacatgatgatgttgatggagaatgctgcttgttgtgtcacagt 2133
|||||||||| ||||| || ||||| || |||||||||||||||||||||||||||||
Sbjct: 547 ttagaatacgagttagctcacgatgacgtagatggagaatgctgcttgttgtgtcacagc 488
Query: 2134 agtgcagccggggattgggtgaattgtggcatatgtggtgagtgggctcactttggctgt 2193
|||||||| || || |||||||| || || ||||||||||||||||| || |||||||||
Sbjct: 487 agtgcagcaggtgactgggtgaactgcggtatatgtggtgagtgggcacattttggctgt 428
Query: 2194 gacagaaggcagggcctaggtgcatttaagg 2224
|| | ||||||| || || ||||||||||
Sbjct: 427 gatcggcggcagggactcggagcatttaagg 397
>gnl|LJGI|TC57586 weakly similar to UniRef100_A7PDP9 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (29%)
Length = 816
Score = 54.0 bits (27), Expect = 4e-06
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 445 cattttcgtcaagcatttctttcagtggtgcagagttcatctacacatacatgggatgct 504
||||||| |||||| ||||| |||| ||| ||| || |||| | |||||||||||||||
Sbjct: 488 cattttcatcaagcctttctctcagcggtacagcgtacatccagccatacatgggatgct 547
Query: 505 ttccaccttgc 515
||||| |||||
Sbjct: 548 ttccagcttgc 558