Miyakogusa Predicted Gene
- Lj3g3v2542360.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2542360.2 Non Chatacterized Hit- tr|E1Z902|E1Z902_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,35.17,0.00000000000002,seg,NULL; Mit_KHE1,Protein of unknown
function DUF2343,CUFF.44156.2
(825 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO035948 weakly similar to UniRef100_Q6NQN0 Cluster: At... 1023 0.0
gnl|LJGI|TC79006 293 9e-79
gnl|LJGI|BP049942 homologue to UniRef100_A6ZRX7 Cluster: Transcr... 287 5e-77
gnl|LJGI|TC71433 similar to UniRef100_A7Q9P1 Cluster: Chromosome... 145 5e-34
>gnl|LJGI|GO035948 weakly similar to UniRef100_Q6NQN0 Cluster: At1g53760; n=1;
Arabidopsis thaliana|Rep: At1g53760 - Arabidopsis
thaliana (Mouse-ear cress), partial (60%)
Length = 740
Score = 1023 bits (516), Expect = 0.0
Identities = 537/545 (98%), Gaps = 1/545 (0%)
Strand = Plus / Plus
Query: 1 atgagagccaaattgatcgtgttcccaatacgaggaagaaactggtgcttctccagatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 atgagagccaaattgatcgtgttcccaatacgaggaagaaactggtgcttctccagatcc 256
Query: 61 attgatcacactctctccgcttccccttcttcctctcaatccccttcatccatcagagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 attgatcacactctctccgcttccccttcttcctctcaatccccttcatccatcagagac 316
Query: 121 ttatggaacaacatcaacgtttctgataaaccccttaacgccaaagctgagcttcttata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ttatggaacaacatcaacgtttctgataaaccccttaacgccaaagctgagcttcttata 376
Query: 181 gactatgcatctagcaagatgaataaagcttgggttggtttggaaatggcacctgctgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gactatgcatctagcaagatgaataaagcttgggttggtttggaaatggcacctgctgga 436
Query: 241 tctttgaagaagaagattcatgggttggggctgtggcttttgtcacgggttaagccatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tctttgaagaagaagattcatgggttggggctgtggcttttgtcacgggttaagccatca 496
Query: 301 gagannnnnnngaaatctatttcgaaggatgtcactggtgttgaagtcatttatccatca 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gagatttttttgaaatctatttcgaaggatgtcactggtgttgaagtcatttatccatca 556
Query: 361 agtttgaatgctcaacttgttcgtcgaagactaaggcatattgctatgaggggaatgatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 agtttgaatgctcaacttgttcgtcgaagactaaggcatattgctatgaggggaatgatc 616
Query: 421 attcaccgtaaatacttctatggttcagtttcattgattccgctgacctctgcattaagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 attcaccgtaaatacttctatggttcagtttcattgattccgctgacctctgcattaagc 676
Query: 481 gttttacctttgcctaatgtcccattcttctggattttatttcgcacttattctcactgg 540
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 677 gttttacctttgcctaatgtcccattcttctgga-tttatttcgcacttattctcactgg 735
Query: 541 agggc 545
|||||
Sbjct: 736 agggc 740
>gnl|LJGI|TC79006
Length = 330
Score = 293 bits (148), Expect = 9e-79
Identities = 148/148 (100%)
Strand = Plus / Plus
Query: 678 ggtgctgcaaccatccaaagaacttgagagtcttgttcatcaaggggacgggcatgacgg 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 ggtgctgcaaccatccaaagaacttgagagtcttgttcatcaaggggacgggcatgacgg 66
Query: 738 tctctgtcatcataccatcctaaaaatttgcaagatatatgatttgaacaccattgatgt 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 tctctgtcatcataccatcctaaaaatttgcaagatatatgatttgaacaccattgatgt 126
Query: 798 tattaaatacgaaaagtccattttttga 825
||||||||||||||||||||||||||||
Sbjct: 127 tattaaatacgaaaagtccattttttga 154
>gnl|LJGI|BP049942 homologue to UniRef100_A6ZRX7 Cluster: Transcriptional activator;
n=1; Saccharomyces cerevisiae YJM789|Rep:
Transcriptional, partial (1%)
Length = 402
Score = 287 bits (145), Expect = 5e-77
Identities = 197/213 (92%), Gaps = 1/213 (0%)
Strand = Plus / Minus
Query: 614 ataagaaggaaactgagctcaaggaccctaaaaatgaaagccatagttcacaggaaccat 673
||||||||||||||||||||||||||||| |||||| ||||| |||||||| || ||| |
Sbjct: 402 ataagaaggaaactgagctcaaggacccttaaaatggaagccctagttcaccgggaccct 343
Query: 674 attgggtgctgcaaccatccaaagaacttgagagtcttgttcatcaaggggacgggcatg 733
|||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 342 attgggtgctgccaccatcccaagaacttgagagtcttgttcatcaaggggacgggcatg 283
Query: 734 acggtctctgtcatcataccat-cctaaaaatttgcaagatatatgatttgaacaccatt 792
|||||||||||||||||||| | ||| ||||||||| |||||||||||||| ||||| ||
Sbjct: 282 acggtctctgtcatcataccctcccttaaaatttgccagatatatgatttggacaccctt 223
Query: 793 gatgttattaaatacgaaaagtccattttttga 825
|||||||||||||||| ||||||| ||||||||
Sbjct: 222 gatgttattaaatacggaaagtcccttttttga 190
>gnl|LJGI|TC71433 similar to UniRef100_A7Q9P1 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 1432
Score = 145 bits (73), Expect = 5e-34
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 608 gtacagataagaaggaaactgagctcaaggaccctaaaaatgaaagccatagttcacagg 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gtacagataagaaggaaactgagctcaaggaccctaaaaatgaaagccatagttcacagg 61
Query: 668 aaccatattgggt 680
|||||||||||||
Sbjct: 62 aaccatattgggt 74