Miyakogusa Predicted Gene
- Lj3g3v2531180.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2531180.1 Non Chatacterized Hit- tr|I3T043|I3T043_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.63,0,seg,NULL;
Chlorophyll a-b binding protein,Chlorophyll a/b binding protein
domain; no description,Chl,CUFF.44171.1
(813 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62376 homologue to UniRef100_Q41038 Cluster: Type II ... 1612 0.0
gnl|LJGI|GO024120 homologue to UniRef100_Q41038 Cluster: Type II... 270 1e-71
gnl|LJGI|AV769813 homologue to UniRef100_Q41038 Cluster: Type II... 200 1e-50
>gnl|LJGI|TC62376 homologue to UniRef100_Q41038 Cluster: Type II chlorophyll a/b
binding protein from photosystem I precursor; n=1; Pisum
sativum|Rep: Type II chlorophyll a/b binding protein
from photosystem I precursor - Pisum sativum (Garden
pea), partial (94%)
Length = 1204
Score = 1612 bits (813), Expect = 0.0
Identities = 813/813 (100%)
Strand = Plus / Plus
Query: 1 atggcttcagcgtgtgcttcctctgccattgcaactcttgcaatctctaccccaagctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 atggcttcagcgtgtgcttcctctgccattgcaactcttgcaatctctaccccaagctcc 142
Query: 61 cagaagaatggatcacccttgggaactacaaaagctttccttagtggaaggaagctgaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 cagaagaatggatcacccttgggaactacaaaagctttccttagtggaaggaagctgaag 202
Query: 121 gtgaacacctttacagcaccagttggggcaagatccaccactacagtgtgtgcagcagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gtgaacacctttacagcaccagttggggcaagatccaccactacagtgtgtgcagcagct 262
Query: 181 gaacctgataggcctctgtggttcccaggaagcacccctcctccatggcttgatggcagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gaacctgataggcctctgtggttcccaggaagcacccctcctccatggcttgatggcagt 322
Query: 241 ctcccaggagattttgggtttgatcctcttggtctttcatctgatccggagagcctgaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ctcccaggagattttgggtttgatcctcttggtctttcatctgatccggagagcctgaga 382
Query: 301 tggaatgtccaagcagagcttgtccactgcagatgggcaatgttgggtgctgctggcatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tggaatgtccaagcagagcttgtccactgcagatgggcaatgttgggtgctgctggcatt 442
Query: 361 ttcatcccagaatttctaacaaagattggtatcctgaacaccccttcatggtacactgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttcatcccagaatttctaacaaagattggtatcctgaacaccccttcatggtacactgct 502
Query: 421 ggagagcaggagtatttcacagacaccaccaccctcttcatagttgagctcattttcatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ggagagcaggagtatttcacagacaccaccaccctcttcatagttgagctcattttcatt 562
Query: 481 ggctgggctgagggtagaaggtgggctgacatcctcaagccaggctctgtcaacactgac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ggctgggctgagggtagaaggtgggctgacatcctcaagccaggctctgtcaacactgac 622
Query: 541 cctatcttccccaacaacaagctcacaggaacagatgttgggtacccaggtgggctttgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 cctatcttccccaacaacaagctcacaggaacagatgttgggtacccaggtgggctttgg 682
Query: 601 tttgacccacttggttggggaagtggttctcctcagaagctcaaggagttgagaacaaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tttgacccacttggttggggaagtggttctcctcagaagctcaaggagttgagaacaaag 742
Query: 661 gagatcaagaatgggagactagccatgttggctgtgatgggtgcttggttccagcacatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gagatcaagaatgggagactagccatgttggctgtgatgggtgcttggttccagcacatt 802
Query: 721 tacactggcactggtcctattgacaacctctttgcccaccttgctgatcctggccatgcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 tacactggcactggtcctattgacaacctctttgcccaccttgctgatcctggccatgcc 862
Query: 781 actgtttttgctgctttcactcccaagtgagaa 813
|||||||||||||||||||||||||||||||||
Sbjct: 863 actgtttttgctgctttcactcccaagtgagaa 895
>gnl|LJGI|GO024120 homologue to UniRef100_Q41038 Cluster: Type II chlorophyll a/b
binding protein from photosystem I precursor; n=1; Pisum
sativum|Rep: Type II chlorophyll a/b binding protein
from photosystem I precursor - Pisum sativum (Garden
pea), partial (16%)
Length = 372
Score = 270 bits (136), Expect = 1e-71
Identities = 136/136 (100%)
Strand = Plus / Plus
Query: 678 actagccatgttggctgtgatgggtgcttggttccagcacatttacactggcactggtcc 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 actagccatgttggctgtgatgggtgcttggttccagcacatttacactggcactggtcc 104
Query: 738 tattgacaacctctttgcccaccttgctgatcctggccatgccactgtttttgctgcttt 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 tattgacaacctctttgcccaccttgctgatcctggccatgccactgtttttgctgcttt 164
Query: 798 cactcccaagtgagaa 813
||||||||||||||||
Sbjct: 165 cactcccaagtgagaa 180
>gnl|LJGI|AV769813 homologue to UniRef100_Q41038 Cluster: Type II chlorophyll a/b
binding protein from photosystem I precursor; n=1; Pisum
sativum|Rep: Type II chlorophyll a/b binding protein
from photosystem I precursor - Pisum sativum (Garden
pea), partial (14%)
Length = 390
Score = 200 bits (101), Expect = 1e-50
Identities = 101/101 (100%)
Strand = Plus / Minus
Query: 693 tgtgatgggtgcttggttccagcacatttacactggcactggtcctattgacaacctctt 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tgtgatgggtgcttggttccagcacatttacactggcactggtcctattgacaacctctt 331
Query: 753 tgcccaccttgctgatcctggccatgccactgtttttgctg 793
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tgcccaccttgctgatcctggccatgccactgtttttgctg 290