Miyakogusa Predicted Gene
- Lj3g3v2520080.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2520080.1 tr|G8A0L2|G8A0L2_MEDTR Maturase K OS=Medicago
truncatula GN=MTR_103s0096 PE=4 SV=1,51.91,0,coiled-coil,NULL; FAMILY
NOT NAMED,NULL; DNA-binding pseudobarrel domain,DNA-binding
pseudobarrel do,CUFF.44134.1
(1660 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC596118 similar to UniRef100_A7QJ19 Cluster: Chromosom... 1124 0.0
gnl|LJGI|TC82401 490 e-137
gnl|LJGI|TC72821 similar to UniRef100_A7QJ19 Cluster: Chromosome... 440 e-122
gnl|LJGI|CB828503 similar to UniRef100_A7QJ19 Cluster: Chromosom... 220 2e-56
gnl|LJGI|TC76835 similar to UniRef100_Q45EZ4 Cluster: RAV-like D... 94 3e-18
gnl|LJGI|FS351831 UniRef100_Q6DT80 Cluster: AT1G01030; n=1; Arab... 76 8e-13
gnl|LJGI|TC67138 similar to UniRef100_Q45EZ4 Cluster: RAV-like D... 62 1e-08
gnl|LJGI|AV412541 homologue to UniRef100_Q4G3H5 Cluster: RAV tra... 60 5e-08
>gnl|LJGI|DC596118 similar to UniRef100_A7QJ19 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 567
Score = 1124 bits (567), Expect = 0.0
Identities = 567/567 (100%)
Strand = Plus / Plus
Query: 763 ctcaatttcgaggaccggaatgggaagctctggcggttccggtactcgtactggaacagc 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcaatttcgaggaccggaatgggaagctctggcggttccggtactcgtactggaacagc 60
Query: 823 agccagagctatgtgatgacaaaaggatggagccggtttgtgaaggagaagaagcttgat 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agccagagctatgtgatgacaaaaggatggagccggtttgtgaaggagaagaagcttgat 120
Query: 883 gccggcgacattgtctcgttccagcgcggtgtcggggacttatgccggcacaggttgtac 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gccggcgacattgtctcgttccagcgcggtgtcggggacttatgccggcacaggttgtac 180
Query: 943 atagattggaggagaaggcctgatcatcatctccctgatccttcatcagcagcactcttc 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atagattggaggagaaggcctgatcatcatctccctgatccttcatcagcagcactcttc 240
Query: 1003 acacctttctttcttcctcccaatcatcatcaccaaccacacttgtcacagtactcaatc 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acacctttctttcttcctcccaatcatcatcaccaaccacacttgtcacagtactcaatc 300
Query: 1063 aggtggggtggtgctaatagcagattctattccccaccacagccgccgcgccaccacctc 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggtggggtggtgctaatagcagattctattccccaccacagccgccgcgccaccacctc 360
Query: 1123 caccatgaccctctgcagcagcagcagctcaattacaaccaccacatgtatcaacatcat 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caccatgaccctctgcagcagcagcagctcaattacaaccaccacatgtatcaacatcat 420
Query: 1183 catcatccatttcacccctaccatgagctgaactcaggatctgggtcaatctattacctg 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 catcatccatttcacccctaccatgagctgaactcaggatctgggtcaatctattacctg 480
Query: 1243 agatcagcaccatcaatgtcaatagctgatcatcaaaccttagcaagacaacaacaacaa 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agatcagcaccatcaatgtcaatagctgatcatcaaaccttagcaagacaacaacaacaa 540
Query: 1303 catcaagaaggaggaggaatcagcagc 1329
|||||||||||||||||||||||||||
Sbjct: 541 catcaagaaggaggaggaatcagcagc 567
>gnl|LJGI|TC82401
Length = 489
Score = 490 bits (247), Expect = e-137
Identities = 250/251 (99%)
Strand = Plus / Plus
Query: 156 cagcagtaagcaccactgccccttttcttcaccctctaatttctctttatcttcttcttc 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 cagcagtaagcaccactgccccttttcttcaccctctaatttctctttatcttcttcttc 298
Query: 216 tccctcaatcacagattacaacaacactcaccatcttcatcatcacaatcatcatgtaat 275
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 299 tccctcaatcacagattacaacaacactcatcatcttcatcatcacaatcatcatgtaat 358
Query: 276 gaacattcctagccaaaattcatggcttggaatgactcatgatgatcctcatcactctcc 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gaacattcctagccaaaattcatggcttggaatgactcatgatgatcctcatcactctcc 418
Query: 336 agaggccaacacagccactgaatctcacaattcatcatctgggttagggttcttgttaca 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 agaggccaacacagccactgaatctcacaattcatcatctgggttagggttcttgttaca 478
Query: 396 ccaagatggag 406
|||||||||||
Sbjct: 479 ccaagatggag 489
Score = 89.7 bits (45), Expect = 5e-17
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 1 atggaactgatccaagaagaagcagtgaaaggttattctgatagc 45
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 atggaactgatccaagaagaagcagtgaaaggttattctgatagc 134
>gnl|LJGI|TC72821 similar to UniRef100_A7QJ19 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 622
Score = 440 bits (222), Expect = e-122
Identities = 222/222 (100%)
Strand = Plus / Plus
Query: 1439 acactgcagcaaaaaggttaaggctatttggggtgaacatggaatgtgcttcttcttcat 1498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 acactgcagcaaaaaggttaaggctatttggggtgaacatggaatgtgcttcttcttcat 97
Query: 1499 cttcatctttaccttctccttctctaccacagaatttgagggtgcctcatgaagacagta 1558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 cttcatctttaccttctccttctctaccacagaatttgagggtgcctcatgaagacagta 157
Query: 1559 caatttcacaatcatcagcaaggtttgggattggggatctccagagaggggaggcttcag 1618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 caatttcacaatcatcagcaaggtttgggattggggatctccagagaggggaggcttcag 217
Query: 1619 tgctttttgatttggacccatctttgcagtatcggcagtgat 1660
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 tgctttttgatttggacccatctttgcagtatcggcagtgat 259
>gnl|LJGI|CB828503 similar to UniRef100_A7QJ19 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 487
Score = 220 bits (111), Expect = 2e-56
Identities = 198/227 (87%)
Strand = Plus / Minus
Query: 631 gagaaagagcacatgtttgacaaagtcgtgacgccgagcgatgtggggaagctgaaccga 690
||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| |
Sbjct: 229 gagaaggagcacatgtttgacaaagtggtgacgccaagcgatgtggggaagctgaacagg 170
Query: 691 ttagtgataccaaaacagcacgctgagaagtacttccctctcgattccgcctcgaatgag 750
| ||||| ||||| ||||| || ||||||||||| ||||| || ||| | || || |||
Sbjct: 169 ctggtgatcccaaagcagcatgcggagaagtactttcctctggactcctcatccaacgag 110
Query: 751 aaggggctacttctcaatttcgaggaccggaatgggaagctctggcggttccggtactcg 810
|| || || || ||||||||||||||||| || |||||||| ||||| ||| |||||||
Sbjct: 109 aaaggccttctcctcaatttcgaggaccgcaacgggaagctgtggcgtttcaggtactct 50
Query: 811 tactggaacagcagccagagctatgtgatgacaaaaggatggagccg 857
|||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 49 tactggaacagcagccagagctatgtgatgaccaaaggatggagccg 3
>gnl|LJGI|TC76835 similar to UniRef100_Q45EZ4 Cluster: RAV-like DNA-binding protein;
n=1; Glycine max|Rep: RAV-like DNA-binding protein -
Glycine max (Soybean), partial (35%)
Length = 735
Score = 93.7 bits (47), Expect = 3e-18
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 793 tggcggttccggtactcgtactggaacagcagccagagctatgtgatgacaaaaggatgg 852
|||||||| || ||||| || |||||||| |||||||||||||| |||| |||||||||
Sbjct: 85 tggcggtttcgttactcttattggaacagtagccagagctatgttttgaccaaaggatgg 144
Query: 853 agccggtttgtgaaggagaagaa 875
|| ||||||||||||||||||||
Sbjct: 145 agtcggtttgtgaaggagaagaa 167
>gnl|LJGI|FS351831 UniRef100_Q6DT80 Cluster: AT1G01030; n=1; Arabidopsis lyrata subsp.
petraea|Rep: AT1G01030 - Arabidopsis lyrata subsp.
petraea (Northern rock-cress) (Cardaminopsispetraea),
partial (6%)
Length = 418
Score = 75.8 bits (38), Expect = 8e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 1457 taaggctatttggggtgaacatggaatgtgcttcttcttcatcttc 1502
||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 410 taaggctatttggtgtgaacatggaatgtgcttcttcttcttcttc 365
>gnl|LJGI|TC67138 similar to UniRef100_Q45EZ4 Cluster: RAV-like DNA-binding protein;
n=1; Glycine max|Rep: RAV-like DNA-binding protein -
Glycine max (Soybean), partial (29%)
Length = 703
Score = 61.9 bits (31), Expect = 1e-08
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 803 ggtactcgtactggaacagcagccagagctatgtgatgacaaaaggatggagccggtttg 862
|||||||||| ||||| || ||||||||||| ||| | || ||||| ||||||||||| |
Sbjct: 5 ggtactcgtattggaatagtagccagagctacgtgcttaccaaagggtggagccggttcg 64
Query: 863 tgaaggagaag 873
| |||||||||
Sbjct: 65 ttaaggagaag 75
>gnl|LJGI|AV412541 homologue to UniRef100_Q4G3H5 Cluster: RAV transcription factor;
n=1; Capsicum annuum|Rep: RAV transcription factor -
Capsicum annuum (Bell pepper), partial (16%)
Length = 304
Score = 60.0 bits (30), Expect = 5e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 664 ccgagcgatgtggggaagctgaaccgattagtgataccaaaacagcacgctgagaagtac 723
||||||||||| |||||||||||||| || |||||||| || ||||| || |||||| ||
Sbjct: 196 ccgagcgatgtagggaagctgaaccgtttggtgataccgaagcagcatgcggagaagcac 255
Query: 724 tt 725
||
Sbjct: 256 tt 257