Miyakogusa Predicted Gene

Lj3g3v2517860.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2517860.2 Non Chatacterized Hit- tr|A5BUV6|A5BUV6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,36.97,2e-18,SUBFAMILY NOT NAMED,NULL; BED FINGER-RELATED,NULL;
C2H2 and C2HC zinc fingers,NULL; Hermes dimerisat,CUFF.44128.2
         (721 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS323294 UniRef100_A8I8R0 Cluster: Predicted protein; n...    88   9e-17

>gnl|LJGI|FS323294 UniRef100_A8I8R0 Cluster: Predicted protein; n=1; Chlamydomonas
           reinhardtii|Rep: Predicted protein - Chlamydomonas
           reinhardtii, partial (6%)
          Length = 725

 Score = 87.7 bits (44), Expect = 9e-17
 Identities = 119/144 (82%)
 Strand = Plus / Plus

                                                                       
Query: 181 tctattgtatgggatcatttcactaagcttcctttggttgagactaaaggtgaacataag 240
           |||||||| |||||||| |||||||| |||||| ||  || ||| || ||||||||||||
Sbjct: 571 tctattgtgtgggatcacttcactaaacttcctatgaatgcgacgaagggtgaacataag 630

                                                                       
Query: 241 gccaaatgcaatcattgttgtgcaatagatagttgtcacccaaacaaacatggaaccaat 300
           || |||||||| |||||| ||  | || | |  || |||||||| |||||||| || || 
Sbjct: 631 gcaaaatgcaaccattgtcgtaaagtatacaactgccacccaaataaacatggtacaaac 690

                                   
Query: 301 tctttgaacaaacatttgcgtagg 324
           ||| ||||||||||||||||||||
Sbjct: 691 tctatgaacaaacatttgcgtagg 714