Miyakogusa Predicted Gene
- Lj3g3v2517670.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2517670.1 Non Chatacterized Hit- tr|I1KHN8|I1KHN8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.47882 PE,74.23,0,HLH,
helix-loop-helix DNA-binding domain,Helix-loop-helix domain;
HLH,Helix-loop-helix domain; SUBFA,CUFF.44118.1
(1143 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76035 similar to UniRef100_A7PXU3 Cluster: Chromosome... 327 9e-89
gnl|LJGI|GO036032 homologue to UniRef100_Q8LB18 Cluster: BHLH DN... 121 1e-26
gnl|LJGI|TC76917 similar to UniRef100_A7NUT0 Cluster: Chromosome... 64 2e-09
gnl|LJGI|TC80943 similar to UniRef100_A7NUT0 Cluster: Chromosome... 58 1e-07
>gnl|LJGI|TC76035 similar to UniRef100_A7PXU3 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 717
Score = 327 bits (165), Expect = 9e-89
Identities = 196/205 (95%), Gaps = 1/205 (0%)
Strand = Plus / Plus
Query: 639 atatattcaaaggggtgaccaagcttcaattattggaggtgcaatagattttgtgaagga 698
|||||||||||||||||||||||||||||| ||||| ||||||||||||| | |||||||
Sbjct: 257 atatattcaaaggggtgaccaagcttcaatcattgg-ggtgcaatagattatatgaagga 315
Query: 699 gttggagcagttggttcaatctcttgaatcacagaaaaggatgagaaaaaatgaagaggc 758
||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 316 gttggagcagttggttcaatcccttgaatcacagaaaaggatgagaaaaaataaagaggg 375
Query: 759 ttgttcttcttcatctgtgttttctaagccaccatcagattcatctccatcacatggttt 818
|||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 376 ttgttcttcttcatctatgttttctaagccaccatcagattcatctccatcacctggttt 435
Query: 819 tggaatgaggtcatcatcatccaca 843
|||||||||||||||||||||||||
Sbjct: 436 tggaatgaggtcatcatcatccaca 460
>gnl|LJGI|GO036032 homologue to UniRef100_Q8LB18 Cluster: BHLH DNA-binding
protein-like protein; n=1; Arabidopsis thaliana|Rep:
BHLH DNA-binding protein-like protein - Arabidopsis
thaliana (Mouse-ear cress), partial (6%)
Length = 539
Score = 121 bits (61), Expect = 1e-26
Identities = 64/65 (98%)
Strand = Plus / Plus
Query: 566 ttgctgttgaacgcaaccggagacgccagatgaatgaccatctcagtgttctaaggtccc 625
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ttgctgttgaacccaaccggagacgccagatgaatgaccatctcagtgttctaaggtccc 422
Query: 626 tcatg 630
|||||
Sbjct: 423 tcatg 427
>gnl|LJGI|TC76917 similar to UniRef100_A7NUT0 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 539
Score = 63.9 bits (32), Expect = 2e-09
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 635 cttcatatattcaaaggggtgaccaagcttcaattattggaggtgcaatagattttgtga 694
|||| ||| ||||||||||||||||||| || |||||||||||||| || | |||||||
Sbjct: 476 cttcttatgttcaaaggggtgaccaagcgtctattattggaggtgctattaactttgtga 535
Query: 695 agga 698
||||
Sbjct: 536 agga 539
>gnl|LJGI|TC80943 similar to UniRef100_A7NUT0 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 770
Score = 58.0 bits (29), Expect = 1e-07
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 628 atgcccccttcatatattcaaaggggtgaccaagcttcaattattggaggtgcaatagat 687
||||| ||||| ||| | ||||||||||| |||||||| || ||||||||||| || |
Sbjct: 538 atgcctccttcttatgtacaaaggggtgatcaagcttctatcattggaggtgccattaac 597
Query: 688 tttgtgaaggagttggagcag 708
|||||||||||| | ||||||
Sbjct: 598 tttgtgaaggagctagagcag 618