Miyakogusa Predicted Gene
- Lj3g3v2517600.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2517600.2 Non Chatacterized Hit- tr|B6QPH9|B6QPH9_PENMQ NTP
binding protein, putative OS=Penicillium
marneffei,36.92,0.56,seg,NULL,CUFF.44121.2
(272 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80062 531 e-151
gnl|LJGI|TC74442 335 8e-92
gnl|LJGI|AV774177 UniRef100_A4WK03 Cluster: CRISPR-associated pr... 331 1e-90
>gnl|LJGI|TC80062
Length = 1243
Score = 531 bits (268), Expect = e-151
Identities = 271/272 (99%)
Strand = Plus / Plus
Query: 1 atgtgtatgatgccttctaacagttttgtttgtacccaaaaatgctccaatgttcaattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 atgtgtatgatgccttctaacagttttgtttgtacccaaaaatgctccaatgttcaattt 701
Query: 61 cttatggcatgtttcagttttcctcaatgccacagaatagcaggaagatggtgccccgac 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 702 cttatggcatgtttcagttttcctcaatgccacagaatagcagcaagatggtgccccgac 761
Query: 121 gaccacaatttcagctgctttagcggctgcgtgactggtgcactaacctgggatgctaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 gaccacaatttcagctgctttagcggctgcgtgactggtgcactaacctgggatgctaca 821
Query: 181 cagcaattaggagcattcaatttcttatgctttcttttcttctctttgttacccaagatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 cagcaattaggagcattcaatttcttatgctttcttttcttctctttgttacccaagatt 881
Query: 241 tacatgtttagccagatgaagaatttgtaaaa 272
||||||||||||||||||||||||||||||||
Sbjct: 882 tacatgtttagccagatgaagaatttgtaaaa 913
>gnl|LJGI|TC74442
Length = 1465
Score = 335 bits (169), Expect = 8e-92
Identities = 172/173 (99%)
Strand = Plus / Plus
Query: 100 gcaggaagatggtgccccgacgaccacaatttcagctgctttagcggctgcgtgactggt 159
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcagcaagatggtgccccgacgaccacaatttcagctgctttagcggctgcgtgactggt 60
Query: 160 gcactaacctgggatgctacacagcaattaggagcattcaatttcttatgctttcttttc 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcactaacctgggatgctacacagcaattaggagcattcaatttcttatgctttcttttc 120
Query: 220 ttctctttgttacccaagatttacatgtttagccagatgaagaatttgtaaaa 272
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttctctttgttacccaagatttacatgtttagccagatgaagaatttgtaaaa 173
>gnl|LJGI|AV774177 UniRef100_A4WK03 Cluster: CRISPR-associated protein, Cas2 family;
n=1; Pyrobaculum arsenaticum DSM 13514|Rep:
CRISPR-associated protein, Cas2 family - Pyrobaculum
arsenaticum (strain DSM 13514 / JCM 11321), partial
(15%)
Length = 472
Score = 331 bits (167), Expect = 1e-90
Identities = 211/222 (95%), Gaps = 3/222 (1%)
Strand = Plus / Minus
Query: 54 tcaatttcttatggcatgtttcagttttcctcaatgccacagaatagcaggaagatggtg 113
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 472 tcaatttcttatggcatgtttcagttttcctcaatgccacagaatancaggaagatggtg 413
Query: 114 ccccgacgaccacaatttcagctgctttagcggctgcgtgactggtgcactaacctggga 173
|||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ccccgacgtcccccatttcagctgctttagcggctgcgtgactggtgcactaacctggga 353
Query: 174 tgctacacagcaattaggagcatt-caatttcttatgctttcttttcttctctttgttac 232
|| |||||||| |||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 352 tggtacacagccattaggagcattccactttcttatgctttcttttcttctctttgttac 293
Query: 233 ccaaga-tttacatgtttagccagatga-agaatttgtaaaa 272
|| ||| ||||||||||||||||||||| |||||||||||||
Sbjct: 292 cccagactttacatgtttagccagatgacagaatttgtaaaa 251