Miyakogusa Predicted Gene

Lj3g3v2484150.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2484150.1 Non Chatacterized Hit- tr|I1LPC9|I1LPC9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2578
PE=,71.86,0,GLYCOSYL_HYDROL_F17,Glycoside hydrolase, family 17;
(Trans)glycosidases,Glycoside hydrolase, superfa,84079_g.1
         (597 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59102 similar to UniRef100_Q6S9W0 Cluster: Endo-1,3-b...    72   4e-12
gnl|LJGI|TC64599 similar to UniRef100_Q6S9W0 Cluster: Endo-1,3-b...    66   3e-10

>gnl|LJGI|TC59102 similar to UniRef100_Q6S9W0 Cluster: Endo-1,3-beta-glucanase; n=3;
            Glycine|Rep: Endo-1,3-beta-glucanase - Glycine max
            (Soybean), partial (97%)
          Length = 1432

 Score = 71.9 bits (36), Expect = 4e-12
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                        
Query: 469  actccaaagaggcctaatggggctattgagacttacttgtttgctatgtttgatgaaaac 528
            ||||| ||||||||||||||  | |||||||||||| ||||||| |||||||||||||||
Sbjct: 956  actccgaagaggcctaatggacccattgagacttacctgtttgccatgtttgatgaaaac 1015


>gnl|LJGI|TC64599 similar to UniRef100_Q6S9W0 Cluster: Endo-1,3-beta-glucanase; n=3;
            Glycine|Rep: Endo-1,3-beta-glucanase - Glycine max
            (Soybean), complete
          Length = 1289

 Score = 65.9 bits (33), Expect = 3e-10
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                        
Query: 469  actccaaagaggcctaatggggctattgagacttacttgtttgctatgtttgatgaaaac 528
            ||||||||||||||||||||  | |||||||||||| | || || ||||||||||| |||
Sbjct: 949  actccaaagaggcctaatggacccattgagacttaccttttcgcgatgtttgatgagaac 1008

                                                     
Query: 529  atgaagcctggtgcagaatctgagcgtcattttggtctctt 569
              |||||| | | ||||| |||||||  | |||||||||||
Sbjct: 1009 cggaagccggatccagaaactgagcggaactttggtctctt 1049