Miyakogusa Predicted Gene
- Lj3g3v2484120.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2484120.1 Non Chatacterized Hit- tr|I1KHQ5|I1KHQ5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,73.2,0,no
description,Nucleotide-binding, alpha-beta plait; seg,NULL; RRM_1,RNA
recognition motif domain; R,CUFF.44095.1
(843 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80300 similar to UniRef100_A7PXT1 Cluster: Chromosome... 955 0.0
gnl|LJGI|GO019513 homologue to UniRef100_A7PXT0 Cluster: Chromos... 527 e-149
gnl|LJGI|DC597943 homologue to UniRef100_A7Q7S9 Cluster: Chromos... 64 2e-09
gnl|LJGI|TC58264 similar to UniRef100_A7Q7S9 Cluster: Chromosome... 64 2e-09
gnl|LJGI|TC76681 similar to UniRef100_A7PXT0 Cluster: Chromosome... 56 4e-07
gnl|LJGI|FS329862 homologue to UniRef100_A7QPG9 Cluster: Chromos... 52 6e-06
>gnl|LJGI|TC80300 similar to UniRef100_A7PXT1 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 867
Score = 955 bits (482), Expect = 0.0
Identities = 482/482 (100%)
Strand = Plus / Plus
Query: 362 cagtggtagcatcacctgcttatcatggttcttcttcatctacatttttctatcaaccaa 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagtggtagcatcacctgcttatcatggttcttcttcatctacatttttctatcaaccaa 60
Query: 422 ctaggcaatacacatttccatattcagcttatggatattctggatattcacaagagacca 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctaggcaatacacatttccatattcagcttatggatattctggatattcacaagagacca 120
Query: 482 tgtatcctacgagttactatggtgtttatggagttcaacagtttccccaatactacccat 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtatcctacgagttactatggtgtttatggagttcaacagtttccccaatactacccat 180
Query: 542 cctctgaggcaggagggttgatacaaaataattatatctaccctttctatggtcaatatg 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cctctgaggcaggagggttgatacaaaataattatatctaccctttctatggtcaatatg 240
Query: 602 cacagaatatacaggctcatggttatggagttcaacacccccaaatggcacagtttccat 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cacagaatatacaggctcatggttatggagttcaacacccccaaatggcacagtttccat 300
Query: 662 ttttgcctcagcattatggttccacagggatattatcacttcctcctccagtggtggcag 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttttgcctcagcattatggttccacagggatattatcacttcctcctccagtggtggcag 360
Query: 722 tgccaactactgcagcagcaacagcaaccacaactacagtatcaacaaatgtggtaatag 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgccaactactgcagcagcaacagcaaccacaactacagtatcaacaaatgtggtaatag 420
Query: 782 cagaagttggtacttcacaagcctctggaacagcatctgaacaaaattctactacatctt 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cagaagttggtacttcacaagcctctggaacagcatctgaacaaaattctactacatctt 480
Query: 842 ga 843
||
Sbjct: 481 ga 482
>gnl|LJGI|GO019513 homologue to UniRef100_A7PXT0 Cluster: Chromosome chr15
scaffold_37, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr15 scaffold_37, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (46%)
Length = 749
Score = 527 bits (266), Expect = e-149
Identities = 294/298 (98%), Gaps = 4/298 (1%)
Strand = Plus / Plus
Query: 1 atgtctcaacaaaggcaaactcagatgatgtttggcggtggttacaataatgacacaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 atgtctcaacaaaggcaaactcagatgatgtttggcggtggttacaataatgacacaaca 511
Query: 61 tttaccaagctctttgttggagggctagcttgggagactcaaagggaaaccatgaggagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tttaccaagctctttgttggagggctagcttgggagactcaaagggaaaccatgaggagg 571
Query: 121 tactttgagcaatttggagagatcttagaggctgttgtcatcacagataagaatacaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 tactttgagcaatttggagagatcttagaggctgttgtcatcacagataagaatacaggg 631
Query: 181 agatccaagggttatggctttgtcacattcaaggatccagagtcagccatgagagcatgt 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 632 agatccaagggttatggctttgtcacattcaa-gatccagagtcagccatgagagcatgt 690
Query: 241 cagaacccatctccagttattgatgggaggagggcaaactgcaatcttgcgtctcttg 298
||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 691 cag-acccatctccagttattgatgggagga-ggcaaactgc-atcttgcgtctcttg 745
>gnl|LJGI|DC597943 homologue to UniRef100_A7Q7S9 Cluster: Chromosome chr18
scaffold_61, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_61, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (23%)
Length = 514
Score = 63.9 bits (32), Expect = 2e-09
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 73 tttgttggagggctagcttgggagactcaaagggaaaccatgaggaggtactttgagcaa 132
|||||||||||| | |||||||||||||| | || ||||||| || || || ||||||
Sbjct: 222 tttgttggagggttggcttgggagactcagaaagagaccatgaagaaatatttcgagcaa 281
Query: 133 tttggagagatcttagaggctgttgtcatcac 164
||||| || ||||| || ||||||||||||||
Sbjct: 282 tttggtgacatcttggaagctgttgtcatcac 313
>gnl|LJGI|TC58264 similar to UniRef100_A7Q7S9 Cluster: Chromosome chr18 scaffold_61,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_61, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 1252
Score = 63.9 bits (32), Expect = 2e-09
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 73 tttgttggagggctagcttgggagactcaaagggaaaccatgaggaggtactttgagcaa 132
|||||||||||| | |||||||||||||| | || ||||||| || || || ||||||
Sbjct: 353 tttgttggagggttggcttgggagactcagaaagagaccatgaagaaatatttcgagcaa 412
Query: 133 tttggagagatcttagaggctgttgtcatcac 164
||||| || ||||| || ||||||||||||||
Sbjct: 413 tttggtgacatcttggaagctgttgtcatcac 444
>gnl|LJGI|TC76681 similar to UniRef100_A7PXT0 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (54%)
Length = 920
Score = 56.0 bits (28), Expect = 4e-07
Identities = 76/92 (82%)
Strand = Plus / Plus
Query: 124 tttgagcaatttggagagatcttagaggctgttgtcatcacagataagaatacagggaga 183
||||| || ||||| |||||| ||||||||||||||||||| || | ||||| || | |
Sbjct: 68 tttgatcagtttggggagatcatagaggctgttgtcatcactgaaagaaatactggaaaa 127
Query: 184 tccaagggttatggctttgtcacattcaagga 215
|| || || ||||||||||| || ||||||||
Sbjct: 128 tcaaaaggatatggctttgtgactttcaagga 159
>gnl|LJGI|FS329862 homologue to UniRef100_A7QPG9 Cluster: Chromosome chr18
scaffold_137, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_137, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (22%)
Length = 724
Score = 52.0 bits (26), Expect = 6e-06
Identities = 92/114 (80%)
Strand = Plus / Plus
Query: 51 tgacacaacatttaccaagctctttgttggagggctagcttgggagactcaaagggaaac 110
|||||| || || |||||| |||| ||||| || | |||||||||||||| || |||||
Sbjct: 607 tgacaccactttcaccaaggtcttcgttggtggattggcttgggagactcagagtgaaac 666
Query: 111 catgaggaggtactttgagcaatttggagagatcttagaggctgttgtcatcac 164
|||| | | |||||||||||||| || ||||| | ||||| ||||| |||||
Sbjct: 667 catgcgtcgttactttgagcaattcggggagattcttgaggcggttgtgatcac 720