Miyakogusa Predicted Gene

Lj3g3v2479900.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2479900.1 Non Chatacterized Hit- tr|A5BGU5|A5BGU5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,34,1e-16,seg,NULL,CUFF.44082.1
         (621 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS347800                                                     278   4e-74

>gnl|LJGI|FS347800 
          Length = 682

 Score =  278 bits (140), Expect = 4e-74
 Identities = 140/140 (100%)
 Strand = Plus / Minus

                                                                       
Query: 453 taatgaagtgatggagtcaaacgaaattgttgaggttccacttgtgattactaatgaagt 512
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 taatgaagtgatggagtcaaacgaaattgttgaggttccacttgtgattactaatgaagt 623

                                                                       
Query: 513 catggagtcaaacaatgtggagactgatcaaaagaagatgaaaggagaaaggatcacatt 572
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 catggagtcaaacaatgtggagactgatcaaaagaagatgaaaggagaaaggatcacatt 563

                               
Query: 573 agcggacctcttcctggctg 592
           ||||||||||||||||||||
Sbjct: 562 agcggacctcttcctggctg 543



 Score = 77.8 bits (39), Expect = 7e-14
 Identities = 48/51 (94%)
 Strand = Plus / Minus

                                                              
Query: 424 gaaattgttgaggttccaattgtgattcctaatgaagtgatggagtcaaac 474
           |||||||||||||||||| |||||||| |||||||||| ||||||||||||
Sbjct: 660 gaaattgttgaggttccacttgtgattactaatgaagtcatggagtcaaac 610