Miyakogusa Predicted Gene
- Lj3g3v2478800.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2478800.1 Non Chatacterized Hit- tr|F6H3H2|F6H3H2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,24.19,2e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; PPR:
pentatricopeptide repeat domain,Pentatricopept,CUFF.44079.1
(1602 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66633 similar to UniRef100_A7QWH8 Cluster: Chromosome... 1461 0.0
gnl|LJGI|TC67711 similar to UniRef100_A7QWH8 Cluster: Chromosome... 1063 0.0
>gnl|LJGI|TC66633 similar to UniRef100_A7QWH8 Cluster: Chromosome undetermined
scaffold_203, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_203,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (34%)
Length = 755
Score = 1461 bits (737), Expect = 0.0
Identities = 740/741 (99%)
Strand = Plus / Plus
Query: 1 atggtattgtcgggaacaacaacctttaagttttcaactttgaggaacccaaactccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 atggtattgtcgggaacaacaacctttaagttttcaactttgaggaacccaaactccaaa 74
Query: 61 aacattggaatgaaccaagtgaagcaaatccatggttacacactaagaactggcatagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 aacattggaatgaaccaagtgaagcaaatccatggttacacactaagaactggcatagac 134
Query: 121 caaaccaaaaccctcattgagaagctacttgaaatcccaaacctgcattatgcccaagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 caaaccaaaaccctcattgagaagctacttgaaatcccaaacctgcattatgcccaagct 194
Query: 181 gtgttgcaccactcacccaactccactgtcttcctctacaacaagctccttcaagcctac 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 195 gtgttgcaccactcacccaactccactgtcttcctctacaacaagctcattcaagcctac 254
Query: 241 tcctcccattcccaacaccaacaccaatgcttctccctttactcccaaatgcgccttctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tcctcccattcccaacaccaacaccaatgcttctccctttactcccaaatgcgccttctt 314
Query: 301 ggtcactcaccaaaccaatacactttcaactttctcttctctacctgcacttccctttcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ggtcactcaccaaaccaatacactttcaactttctcttctctacctgcacttccctttcc 374
Query: 361 tccctttccctcggccaaatgctccatgcccacttcatcaaatcaggctttgcacctgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tccctttccctcggccaaatgctccatgcccacttcatcaaatcaggctttgcacctgat 434
Query: 421 gtctttgccgccaccgcgttgctcgacatgtatgcgaaagtgggtacgttggagctcgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gtctttgccgccaccgcgttgctcgacatgtatgcgaaagtgggtacgttggagctcgca 494
Query: 481 cgccggctgtttgatgaaatgcctgtgagagaggtacccacctggaacgctatgatggcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 cgccggctgtttgatgaaatgcctgtgagagaggtacccacctggaacgctatgatggcg 554
Query: 541 gggcatgcgaggtttggtgatgtggatggagcgttggagttgttcaggttgatgccttct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gggcatgcgaggtttggtgatgtggatggagcgttggagttgttcaggttgatgccttct 614
Query: 601 aggaatgtggtgtcatggaccaccatgatatctggttactcgaagaacaagcagtatgag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 aggaatgtggtgtcatggaccaccatgatatctggttactcgaagaacaagcagtatgag 674
Query: 661 aaggctttggggttgttcctgaggatggagtgtgaggaagatattatgcccaatgcagta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 aaggctttggggttgttcctgaggatggagtgtgaggaagatattatgcccaatgcagta 734
Query: 721 actttggcaagcattttgcca 741
|||||||||||||||||||||
Sbjct: 735 actttggcaagcattttgcca 755
>gnl|LJGI|TC67711 similar to UniRef100_A7QWH8 Cluster: Chromosome undetermined
scaffold_203, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_203, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(31%)
Length = 722
Score = 1063 bits (536), Expect = 0.0
Identities = 539/540 (99%)
Strand = Plus / Plus
Query: 1063 ggcatggttgaaaaaggcaggcatatcttcaagtcaatgaaaacagacttcaacatcatt 1122
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcatggttgaaaaaggcaggcgtatcttcaagtcaatgaaaacagacttcaacatcatt 60
Query: 1123 cccaaactagaacactatggctgcatggttgatctactaggccgcgctgggaagttgaga 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cccaaactagaacactatggctgcatggttgatctactaggccgcgctgggaagttgaga 120
Query: 1183 gaagcttatgaggtcatacaaactatgccaatgaaaccagactcagtaatatgggggact 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaagcttatgaggtcatacaaactatgccaatgaaaccagactcagtaatatgggggact 180
Query: 1243 ctattaggagcttgcagctttcatggtaatgttgagctggctgagatagcagctgagtca 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctattaggagcttgcagctttcatggtaatgttgagctggctgagatagcagctgagtca 240
Query: 1303 ctatttacacttgagcctcggaacccgggaaactatgtcattctttccaacatttatgca 1362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctatttacacttgagcctcggaacccgggaaactatgtcattctttccaacatttatgca 300
Query: 1363 tcagcggatcaatgggacggagttgcaaagctcagaaaggtgatgaagggaagccaaatt 1422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcagcggatcaatgggacggagttgcaaagctcagaaaggtgatgaagggaagccaaatt 360
Query: 1423 acaaaatcagctggacatagtttccttgaagagggaggtcagctgcataagttcattgtg 1482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acaaaatcagctggacatagtttccttgaagagggaggtcagctgcataagttcattgtg 420
Query: 1483 gaggatagatcacatccaaaaagcaatgaaatttttgctttgcttgatggagtttatgaa 1542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaggatagatcacatccaaaaagcaatgaaatttttgctttgcttgatggagtttatgaa 480
Query: 1543 atgtttaagttcaatagaagtgcatttgagtgccatttggatcttgatttgtgcaactaa 1602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atgtttaagttcaatagaagtgcatttgagtgccatttggatcttgatttgtgcaactaa 540