Miyakogusa Predicted Gene
- Lj3g3v2476560.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2476560.1 tr|G8JGY3|G8JGY3_ARAHA At2g46550-like protein
(Fragment) OS=Arabidopsis halleri PE=4 SV=1,38.69,1e-18,seg,NULL;
coiled-coil,NULL,CUFF.44049.1
(1269 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69184 weakly similar to UniRef100_Q8L732 Cluster: Exp... 2500 0.0
gnl|LJGI|TC60756 similar to UniRef100_A7QF18 Cluster: Chromosome... 123 3e-27
>gnl|LJGI|TC69184 weakly similar to UniRef100_Q8L732 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein - Arabidopsis
thaliana (Mouse-ear cress), partial (32%)
Length = 1566
Score = 2500 bits (1261), Expect = 0.0
Identities = 1267/1269 (99%)
Strand = Plus / Plus
Query: 1 atggcagcagcagaagtgagggctgcaaggcagaaaactgcagatcattgcgttgtccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 atggcagcagcagaagtgagggctgcaaggcagaaaactgcagatcattgcgttgtccaa 236
Query: 61 gaagacgccaaacgagctcctaagtttgcctgttgccaatcttcatgtgcaacatcaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 gaagacgccaaacgagctcctaagtttgcctgttgccaatcttcatgtgcaacatcaaaa 296
Query: 121 ttggttgatgctggatctgccagtgcagcagatgaacctgatcaggcttgtgttaatgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ttggttgatgctggatctgccagtgcagcagatgaacctgatcaggcttgtgttaatgac 356
Query: 181 actcatgttaaccaaaaatcttcattttccaatagaattcttgactcaagatggtggttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 actcatgttaaccaaaaatcttcattttccaatagaattcttgactcaagatggtggttg 416
Query: 241 aatttgcatcctaactgtgggtttgaaaaaggcttagcaaatgagaagttaaaagctttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 aatttgcatcctaactgtgggtttgaaaaaggcttagcaaatgagaagttaaaagctttg 476
Query: 301 gaggaaaaggttgaaaatttggaagttgaagaaaatgaaacatgtaaaggagaaaacttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gaggaaaaggttgaaaatttggaagttgaagaaaatgaaacatgtaaaggagaaaacttc 536
Query: 361 caggagggtattaagcagaaaacttgtatgaaaggaatgcaagatgagatgatggagatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 caggagggtattaagcagaaaacttgtatgaaaggaatgcaagatgagatgatggagatt 596
Query: 421 gattctgttggatgctccaaccaaacattagatttctcattgatttcagattattcttgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 gattctgttggatgctccaaccaaacattagatttctcattgatttcagattattcttgg 656
Query: 481 attgaaggtgagaaaccccatccatggtggcaaactacagatagaaatgaattagctagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 attgaaggtgagaaaccccatccatggtggcaaactacagatagaaatgaattagctagc 716
Query: 541 tttgtgtcacagaaatcactcaacaatattgagaattgtgaccttcctcctcctcggaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 tttgtgtcacagaaatcactcaacaatattgagaattgtgaccttcctcctcctcggaag 776
Query: 601 aactacctaggaggacaatcaaatgcttatatcagtgatgagaaaattaacacaataggt 660
|||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 777 aactacataggaggacaatcaaatgcttatatcagtgatgagaagattaacacaataggt 836
Query: 661 tttgattgggaagccaaatctagtgtcttctccaatttaactgatcaggcacagggaagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 tttgattgggaagccaaatctagtgtcttctccaatttaactgatcaggcacagggaagt 896
Query: 721 ttggattcaggatttatgcaaggaaatctaagacattcacattttgcttgtgacaaatct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 ttggattcaggatttatgcaaggaaatctaagacattcacattttgcttgtgacaaatct 956
Query: 781 ccaagttataccagtaccatccatgaggatgtcacagaacaagcttttgagggagaccaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 ccaagttataccagtaccatccatgaggatgtcacagaacaagcttttgagggagaccaa 1016
Query: 841 agcatagctcaacttatggaagcactgtgtcattctcaaacacgtgcaagggcagcagag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 agcatagctcaacttatggaagcactgtgtcattctcaaacacgtgcaagggcagcagag 1076
Query: 901 gaggtagcaaaacaagcttatgctgagaaagagcacatttttacacagtttttaatgcag 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1077 gaggtagcaaaacaagcttatgctgagaaagagcacatttttacacagtttttaatgcag 1136
Query: 961 gcttcacaacttcttgcatatgaacaatggtttcgtctgctgcagctagaaactgataac 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 gcttcacaacttcttgcatatgaacaatggtttcgtctgctgcagctagaaactgataac 1196
Query: 1021 acttctcaaattaagaataaggatcagcaagtctctacaaaattcccagagacacttcca 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1197 acttctcaaattaagaataaggatcagcaagtctctacaaaattcccagagacacttcca 1256
Query: 1081 tggatattatttgaaggtaggaaactacagaagagaaagaagctacttgtaaatgccaaa 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1257 tggatattatttgaaggtaggaaactacagaagagaaagaagctacttgtaaatgccaaa 1316
Query: 1141 aaagaaatgctaggcaagctaaaaagtgatagaagaacatatgctgttgcatttgcttta 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1317 aaagaaatgctaggcaagctaaaaagtgatagaagaacatatgctgttgcatttgcttta 1376
Query: 1201 ggattgagtcttgttggggctggcttactcttaggatggactgttggttggatgtttcct 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1377 ggattgagtcttgttggggctggcttactcttaggatggactgttggttggatgtttcct 1436
Query: 1261 cgtttgtag 1269
|||||||||
Sbjct: 1437 cgtttgtag 1445
>gnl|LJGI|TC60756 similar to UniRef100_A7QF18 Cluster: Chromosome chr16 scaffold_86,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_86, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 977
Score = 123 bits (62), Expect = 3e-27
Identities = 134/158 (84%)
Strand = Plus / Plus
Query: 857 tggaagcactgtgtcattctcaaacacgtgcaagggcagcagaggaggtagcaaaacaag 916
|||||||| ||||||| ||||||||||||||||||| ||||||||| | ||||||||||
Sbjct: 349 tggaagcattgtgtcactctcaaacacgtgcaagggaagcagaggaagctgcaaaacaag 408
Query: 917 cttatgctgagaaagagcacatttttacacagtttttaatgcaggcttcacaacttcttg 976
||| || |||||||| |||||| ||| || |||| | ||||||||||||||| |||
Sbjct: 409 ctttcgcagagaaagatcacattgttaaactcatttttaaacaggcttcacaactttttg 468
Query: 977 catatgaacaatggtttcgtctgctgcagctagaaact 1014
||||| | |||||||||| ||||||||||| ||||||
Sbjct: 469 catataagcaatggtttcaactgctgcagctggaaact 506
Score = 105 bits (53), Expect = 7e-22
Identities = 80/89 (89%)
Strand = Plus / Plus
Query: 1176 aacatatgctgttgcatttgctttaggattgagtcttgttggggctggcttactcttagg 1235
||||||||||||||| ||||||||||||| ||||||||||||| ||||| ||||||||
Sbjct: 665 aacatatgctgttgccattgctttaggattcggtcttgttggggcaggcttgctcttagg 724
Query: 1236 atggactgttggttggatgtttcctcgtt 1264
|||||| || ||||||||||| |||||||
Sbjct: 725 atggacagtgggttggatgttacctcgtt 753
Score = 54.0 bits (27), Expect = 2e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 540 ctttgtgtcacagaaatcactcaacaatattgagaattgtgaccttcctcc 590
|||||| ||||| ||||| |||||| |||| ||||||||||| ||||||||
Sbjct: 8 ctttgtttcacaaaaatccctcaaccatatcgagaattgtgatcttcctcc 58