Miyakogusa Predicted Gene
- Lj3g3v2455430.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2455430.1 Non Chatacterized Hit- tr|F6I6F2|F6I6F2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,72.82,0,Importin-beta N-terminal domain,Importin-beta, N-terminal;
IMPORTIN-ALPHA RE-EXPORTER (CHROMOSOME SE,CUFF.44050.1
(2930 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82567 similar to UniRef100_A7QWF1 Cluster: Chromosome... 1550 0.0
gnl|LJGI|TC70327 weakly similar to UniRef100_A7QWF1 Cluster: Chr... 1215 0.0
gnl|LJGI|AV411158 similar to UniRef100_Q9ZPY7 Cluster: Importin-... 813 0.0
gnl|LJGI|AV408801 similar to UniRef100_A7QWF1 Cluster: Chromosom... 599 e-170
gnl|LJGI|TC69911 weakly similar to UniRef100_Q9ZPY7 Cluster: Imp... 563 e-159
>gnl|LJGI|TC82567 similar to UniRef100_A7QWF1 Cluster: Chromosome undetermined
scaffold_203, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_203,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (27%)
Length = 793
Score = 1550 bits (782), Expect = 0.0
Identities = 790/793 (99%)
Strand = Plus / Plus
Query: 43 ttcctccacactctctctccggcaccggagcctcgccgccgcgccgaatcctcactcgcc 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcctccacactctctctccggcaccggagcctcgccgccgcgccgaatcctcactcgcc 60
Query: 103 gatgccgctgcccaacccaacttcgccctcgccgtcatccgcctcgtcgccgaaccttcc 162
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 61 gatgccgctgcccaacccaacttcgccctcgccgtcatccgcctcgtcaccgaaccttcc 120
Query: 163 atcgacgagcagatccgccaacccgccgccgtcaccttcaagaaccacctccgcctccgc 222
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcgacgagcagatccgccaagccgccgccgtcaccttcaagaaccacctccgcctccgc 180
Query: 223 tggtccaccgacgacgccccgatcctcgagcctgagaaggagcagatcaaaaccctaatc 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggtccaccgacgacgccccgatcctcgagcctgagaaggagcagatcaaaaccctaatc 240
Query: 283 gtcccgctcatgctctccgctactcccaaaatccaggcgcagctcagtgaagccctagcc 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtcccgctcatgctctccgctactcccaaaatccaggcgcagctcagtgaagccctagcc 300
Query: 343 atcatcagcaaccacgatttccccaaatcgtggccgcagcttctaccggaactcatctcc 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atcatcagcaaccacgatttccccaaatcgtggccgcagcttctaccggaactcatctcc 360
Query: 403 agcctccagactgcgtcgcaggcctccgattatgcttccattaacggtattctccgtact 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agcctccagactgcgtcgcaggcctccgattatgcttccattaacggtattctccgtact 420
Query: 463 gctaattctattttcaagaagtttcgattccagtacaaaaccaatgatctcttgcttgat 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gctaattctattttcaagaagtttcgattccagtacaaaaccaatgatctcttgcttgat 480
Query: 523 ttgaagacgtgtttggataattttgctcggcctttacttgagattttccttaaaaccgct 582
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttgaagacgtgtttggataatttngctcggcctttacttgagattttccttaaaaccgct 540
Query: 583 tcgttgatcgatgctgctgccgcgaacccggctacggccgcggcgaatttgcgacccctt 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcgttgatcgatgctgctgccgcgaacccggctacggccgcggcgaatttgcgacccctt 600
Query: 643 ttcgagtcgcagaggttgtgctgtaggatattttactcgctgaattttcaggagctccct 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttcgagtcgcagaggttgtgctgtaggatattttactcgctgaattttcaggagctccct 660
Query: 703 gagttttttgaggatcacatgggtgagtggatgaatcagttccgaaaatacctcactact 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gagttttttgaggatcacatgggtgagtggatgaatcagttccgaaaatacctcactact 720
Query: 763 agctaccctgcccttgagggaagtggtcctgatggtgttgcgcttgtggatgatcttagg 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 agctaccctgcccttgagggaagtggtcctgatggtgttgcgcttgtggatgatcttagg 780
Query: 823 gctgctgtttgtg 835
|||||||||||||
Sbjct: 781 gctgctgtttgtg 793
>gnl|LJGI|TC70327 weakly similar to UniRef100_A7QWF1 Cluster: Chromosome undetermined
scaffold_203, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_203, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(22%)
Length = 837
Score = 1215 bits (613), Expect = 0.0
Identities = 616/617 (99%)
Strand = Plus / Plus
Query: 2314 tctcacatttgggctgctcttttcagagagctccagagaaggcggacatcagtaaagctc 2373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tctcacatttgggctgctcttttcagagagctccagagaaggcggacatcagtaaagctc 62
Query: 2374 atcaaatctctcttgatatttatgtcactctttctgattaagcatggcacttcaaatgtt 2433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 atcaaatctctcttgatatttatgtcactctttctgattaagcatggcacttcaaatgtt 122
Query: 2434 gttgatactatgaacagtgttcagccgggtatatttactatgattttgaatcagttctgg 2493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gttgatactatgaacagtgttcagccgggtatatttactatgattttgaatcagttctgg 182
Query: 2494 attcctaatcttaagctaattactggagctatagagctcaaattgactgcagttgcttca 2553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 attcctaatcttaagctaattactggagctatagagctcaaattgactgcagttgcttca 242
Query: 2554 accagacttatctgtgagtctccagtccttttagatcctgcagcttctgcatcctggggt 2613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 accagacttatctgtgagtctccagtccttttagatcctgcagcttctgcatcctggggt 302
Query: 2614 aagatggtggatagcattgtcacacttctttcccggccagaagaggatagagttgaggaa 2673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aagatggtggatagcattgtcacacttctttcccggccagaagaggatagagttgaggaa 362
Query: 2674 gaacttgacatgccagatattgcagaaaatgtgggttatacggccacctttgttcgactt 2733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gaacttgacatgccagatattgcagaaaatgtgggttatacggccacctttgttcgactt 422
Query: 2734 tacaatgctggaaagaaagaagaagatccacttaaagatatagcagatcccaggcaattt 2793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tacaatgctggaaagaaagaagaagatccacttaaagatatagcagatcccaggcaattt 482
Query: 2794 tttgttgcttcattgtctcaactttctacagtttcccctgggaggtaccctaaggtcatc 2853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tttgttgcttcattgtctcaactttctacagtttcccctgggaggtaccctaaggtcatc 542
Query: 2854 agtgaaaatgttgatccggcaaatcaatcagcattggttcagctttgcaacacttacaat 2913
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 543 agtgaaaatgttgatccggcaaatcaatcagcattggttcagctttgtaacacttacaat 602
Query: 2914 cactcaatagtttgaga 2930
|||||||||||||||||
Sbjct: 603 cactcaatagtttgaga 619
>gnl|LJGI|AV411158 similar to UniRef100_Q9ZPY7 Cluster: Importin-alpha re-exporter; n=2;
Arabidopsis thaliana|Rep: Importin-alpha re-exporter -
Arabidopsis thaliana (Mouse-ear cress), partial (14%)
Length = 410
Score = 813 bits (410), Expect = 0.0
Identities = 410/410 (100%)
Strand = Plus / Plus
Query: 1673 aaatgctgatgatcaatcttttcggcaccttcaagctaccagagtctgaagagaatcaat 1732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaatgctgatgatcaatcttttcggcaccttcaagctaccagagtctgaagagaatcaat 60
Query: 1733 atgtgatgaaatgtattatgagggttcttggggttgcagatataacggttgatgttgctc 1792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgtgatgaaatgtattatgagggttcttggggttgcagatataacggttgatgttgctc 120
Query: 1793 gattttgcatcgaggggctggcttctcttctttccgaagtttgcaaaaatccaaaaaatc 1852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gattttgcatcgaggggctggcttctcttctttccgaagtttgcaaaaatccaaaaaatc 180
Query: 1853 ccatcttcaatcactatctctttgagtcagtggccattcttgtgaggcgggcttgtgaga 1912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccatcttcaatcactatctctttgagtcagtggccattcttgtgaggcgggcttgtgaga 240
Query: 1913 gggactcatctcttgtatctgttttcgagacaagcctttttcctagacttcaaataatat 1972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gggactcatctcttgtatctgttttcgagacaagcctttttcctagacttcaaataatat 300
Query: 1973 tatccaatgatgtaactgagtttttcccatacacatttcagttgcttgcccagcttgttg 2032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tatccaatgatgtaactgagtttttcccatacacatttcagttgcttgcccagcttgttg 360
Query: 2033 agttaaacagaccccccatcccaccactctacatgcaaatatttgagatt 2082
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agttaaacagaccccccatcccaccactctacatgcaaatatttgagatt 410
>gnl|LJGI|AV408801 similar to UniRef100_A7QWF1 Cluster: Chromosome undetermined
scaffold_203, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_203, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(10%)
Length = 308
Score = 599 bits (302), Expect = e-170
Identities = 305/306 (99%)
Strand = Plus / Plus
Query: 1177 gagctgcttaagggtattgcaacccattatggagatgctgtcagaagcattgtttctgca 1236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gagctgcttaagggtattgcaacccattatggagatgctgtcagaagcattgtttctgca 62
Query: 1237 cagatacaaagtttattaagttcctttaatgcaaaccctgtggcaaattggaaggacaag 1296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 cagatacaaagtttattaagttcctttaatgcaaaccctgtggcaaattggaaggacaag 122
Query: 1297 gattgtgctatatacttggtagtgtctcttgcaaccaaaaaggctggaaccagttatgtc 1356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gattgtgctatatacttggtagtgtctcttgcaaccaaaaaggctggaaccagttatgtc 182
Query: 1357 tccacagaacttgttgatgttcccagttttttcgaagctgtgattgtccctgagcttgtg 1416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tccacagaacttgttgatgttcccagttttttcgaagctgtgattgtccctgagcttgtg 242
Query: 1417 attgcccctgagcagcaaagagatgtgaataagcatcctatgcttaaggctggtgcactc 1476
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 243 attgcccctgagcagcaaagagatgtgaataagcatcctatgcttaaagctggtgcactc 302
Query: 1477 aaattt 1482
||||||
Sbjct: 303 aaattt 308
>gnl|LJGI|TC69911 weakly similar to UniRef100_Q9ZPY7 Cluster: Importin-alpha
re-exporter; n=2; Arabidopsis thaliana|Rep:
Importin-alpha re-exporter - Arabidopsis thaliana
(Mouse-ear cress), partial (9%)
Length = 648
Score = 563 bits (284), Expect = e-159
Identities = 284/284 (100%)
Strand = Plus / Plus
Query: 2647 cggccagaagaggatagagttgaggaagaacttgacatgccagatattgcagaaaatgtg 2706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cggccagaagaggatagagttgaggaagaacttgacatgccagatattgcagaaaatgtg 60
Query: 2707 ggttatacggccacctttgttcgactttacaatgctggaaagaaagaagaagatccactt 2766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggttatacggccacctttgttcgactttacaatgctggaaagaaagaagaagatccactt 120
Query: 2767 aaagatatagcagatcccaggcaattttttgttgcttcattgtctcaactttctacagtt 2826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaagatatagcagatcccaggcaattttttgttgcttcattgtctcaactttctacagtt 180
Query: 2827 tcccctgggaggtaccctaaggtcatcagtgaaaatgttgatccggcaaatcaatcagca 2886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcccctgggaggtaccctaaggtcatcagtgaaaatgttgatccggcaaatcaatcagca 240
Query: 2887 ttggttcagctttgcaacacttacaatcactcaatagtttgaga 2930
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttggttcagctttgcaacacttacaatcactcaatagtttgaga 284