Miyakogusa Predicted Gene

Lj3g3v2453400.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2453400.1 Non Chatacterized Hit- tr|K4AZZ7|K4AZZ7_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,36.11,0.000000000000004,seg,NULL; DUF688,Protein of unknown
function DUF688,NODE_46355_length_977_cov_20.421700.path2.1
         (627 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO025564 similar to UniRef100_A7QWF3 Cluster: Chromosom...    70   2e-11

>gnl|LJGI|GO025564 similar to UniRef100_A7QWF3 Cluster: Chromosome undetermined
           scaffold_203, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_203,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (28%)
          Length = 544

 Score = 69.9 bits (35), Expect = 2e-11
 Identities = 80/95 (84%)
 Strand = Plus / Plus

                                                                       
Query: 72  aatgcagtcaccagagcgatcagggatgctaacacctcctataaacacctcagctgcagt 131
           |||||| || |||||| || |||| |||||||| |||||| |  | ||||||||  ||||
Sbjct: 189 aatgcattctccagagagaccaggaatgctaactcctcctctccatacctcagcatcagt 248

                                              
Query: 132 cccatttcgctgggaacaagagcctggaaagccaa 166
           ||||||| | |||||| ||||||||||||||||||
Sbjct: 249 cccatttggatgggaagaagagcctggaaagccaa 283