Miyakogusa Predicted Gene
- Lj3g3v2443330.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2443330.1 Non Chatacterized Hit- tr|F6I6E8|F6I6E8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,61.16,0,ZF_RING_2,Zinc finger, RING-type; JMJC,JmjC domain;
Clavaminate synthase-like,NULL; A domain family
,NODE_79887_length_2719_cov_12.501287.path2.1
(2583 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60731 similar to UniRef100_A7QWE7 Cluster: Chromosome... 1185 0.0
gnl|LJGI|TC64175 similar to UniRef100_A7QWE7 Cluster: Chromosome... 1146 0.0
gnl|LJGI|BP028413 similar to UniRef100_O04698 Cluster: Chloropla... 56 1e-06
gnl|LJGI|TC73824 similar to UniRef100_A2Q2B0 Cluster: Jumonji do... 54 4e-06
>gnl|LJGI|TC60731 similar to UniRef100_A7QWE7 Cluster: Chromosome undetermined
scaffold_203, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_203,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (20%)
Length = 787
Score = 1185 bits (598), Expect = 0.0
Identities = 598/598 (100%)
Strand = Plus / Plus
Query: 1 atgaagaaaagaaaagtcgccgatcgatcggagccggagcggattggaaattcggcgggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 atgaagaaaagaaaagtcgccgatcgatcggagccggagcggattggaaattcggcgggg 249
Query: 61 aatcaaacgccgacggagaaaaccgttgataaggatataaaacaagtccaagtggctgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 aatcaaacgccgacggagaaaaccgttgataaggatataaaacaagtccaagtggctgta 309
Query: 121 agtttgatgtgtcatcagtgccagaggaatgacaagggtggtgttgtcttttgttcaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 agtttgatgtgtcatcagtgccagaggaatgacaagggtggtgttgtcttttgttcaagt 369
Query: 181 tgcaacagaaaacgttactgttatatttgcattgacaagtggtaccctggaaaaaccaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tgcaacagaaaacgttactgttatatttgcattgacaagtggtaccctggaaaaaccaga 429
Query: 241 gaggagtttgagactctgtgtccattttgttttggcaattgtaactgcaaagcttgcttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gaggagtttgagactctgtgtccattttgttttggcaattgtaactgcaaagcttgcttg 489
Query: 301 cgcgaggttcctgtgctaaggcacccagaagtagatgcaagtgtcaaattacaaagactc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 cgcgaggttcctgtgctaaggcacccagaagtagatgcaagtgtcaaattacaaagactc 549
Query: 361 gtttacttgctatataaagctctgcctgttctgaggcatattcacagggagcagagcttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gtttacttgctatataaagctctgcctgttctgaggcatattcacagggagcagagcttg 609
Query: 421 gagttagagattgaatccaaaagaacggatactcaactgcaagaaattgacattacaagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gagttagagattgaatccaaaagaacggatactcaactgcaagaaattgacattacaagg 669
Query: 481 accaagctagccgaaaatgaacgcttgtactgtgacaattgcaatacatcaataattgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 accaagctagccgaaaatgaacgcttgtactgtgacaattgcaatacatcaataattgga 729
Query: 541 ttttaccgtagctgccccaacaccagttgctcttatgatctatgtctcacgtgctgtc 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ttttaccgtagctgccccaacaccagttgctcttatgatctatgtctcacgtgctgtc 787
>gnl|LJGI|TC64175 similar to UniRef100_A7QWE7 Cluster: Chromosome undetermined
scaffold_203, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_203, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(20%)
Length = 754
Score = 1146 bits (578), Expect = 0.0
Identities = 578/578 (100%)
Strand = Plus / Plus
Query: 2006 aaagaccgaggtttgattttatagatgatattgtgtctggtgatcccaagttagagccaa 2065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaagaccgaggtttgattttatagatgatattgtgtctggtgatcccaagttagagccaa 60
Query: 2066 aacaaggcctggagaaagattctctggtaaatgaaaatggagctgaggttgtgcttggtg 2125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aacaaggcctggagaaagattctctggtaaatgaaaatggagctgaggttgtgcttggtg 120
Query: 2126 ctgctgtctgggatatctttcgtcggcaagacgttccaaagctaattgagtatttaagaa 2185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgctgtctgggatatctttcgtcggcaagacgttccaaagctaattgagtatttaagaa 180
Query: 2186 agcacaagaaggaattccgtcatatcaacaatcaacctgtggattctgtcatacatccca 2245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agcacaagaaggaattccgtcatatcaacaatcaacctgtggattctgtcatacatccca 240
Query: 2246 ttcatgatcagactctattcttaaatgagaggcataaaaaacagcttaaaagggagttca 2305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttcatgatcagactctattcttaaatgagaggcataaaaaacagcttaaaagggagttca 300
Query: 2306 atattgaaccatggacttttgagcaacaccttggtgaggctgttttcattccagcaggat 2365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atattgaaccatggacttttgagcaacaccttggtgaggctgttttcattccagcaggat 360
Query: 2366 gtcctcatcaagtcagaaatagacaatcttgtataaaggttgcgcttgattttgtttcgc 2425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtcctcatcaagtcagaaatagacaatcttgtataaaggttgcgcttgattttgtttcgc 420
Query: 2426 cggaaaatgttgaagaatgtttacaattaactggagagtttcgtctgctcccgaaaaacc 2485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cggaaaatgttgaagaatgtttacaattaactggagagtttcgtctgctcccgaaaaacc 480
Query: 2486 accgagccaaagaggataaattggaggttaaaaagatgaccctttatgctgtaagtaagg 2545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 accgagccaaagaggataaattggaggttaaaaagatgaccctttatgctgtaagtaagg 540
Query: 2546 ctgttagagaagtcaaagaattgatgatggccaaatga 2583
||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctgttagagaagtcaaagaattgatgatggccaaatga 578
>gnl|LJGI|BP028413 similar to UniRef100_O04698 Cluster: Chloroplast DNA-binding protein
PD3; n=1; Pisum sativum|Rep: Chloroplast DNA-binding
protein PD3 - Pisum sativum (Garden pea), partial (5%)
Length = 528
Score = 56.0 bits (28), Expect = 1e-06
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 2333 accttggtgaggctgttttcattccagcaggatgtcctcatcaagtcagaaataga 2388
||||||| |||||||||||||| || ||||| || || |||||||| |||||||||
Sbjct: 528 accttggcgaggctgttttcatacctgcagggtgcccacatcaagtgagaaataga 473
>gnl|LJGI|TC73824 similar to UniRef100_A2Q2B0 Cluster: Jumonji domain-containing
protein 1A , related; n=1; Medicago truncatula|Rep:
Jumonji domain-containing protein 1A , related - Medicago
truncatula (Barrel medic), complete
Length = 588
Score = 54.0 bits (27), Expect = 4e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 2308 attgaaccatggacttttgagcaacaccttggtgaggctgttttcattccagcaggatg 2366
|||||||||||||||||||||||||| ||| || ||||| |||||||||| |||||
Sbjct: 23 attgaaccatggacttttgagcaacatgctggagaagctgtcatcattccagctggatg 81