Miyakogusa Predicted Gene
- Lj3g3v2443180.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2443180.1 tr|H8WVC3|H8WVC3_LOTJA E3 ubiquitin ligase
OS=Lotus japonicus GN=SINA1 PE=2 SV=1,99.67,0,SEVEN IN ABSENTIA
HOMOLOG,Seven-in-absentia protein, sina; ZF_RING_2,Zinc finger,
RING-type; ZF_SIAH,NODE_24835_length_1502_cov_79.589882.path2.1
(921 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66464 homologue to UniRef100_A8W461 Cluster: SINA2; n... 1818 0.0
gnl|LJGI|TC69704 homologue to UniRef100_A8W464 Cluster: SINA5; n... 997 0.0
gnl|LJGI|TC68066 homologue to UniRef100_A8W463 Cluster: SINA4; n... 248 5e-65
gnl|LJGI|AV778762 similar to UniRef100_A8W464 Cluster: SINA5; n=... 143 2e-33
gnl|LJGI|TC62546 similar to UniRef100_Q9XGC3 Cluster: SINA2p; n=... 56 4e-07
gnl|LJGI|TC78090 homologue to UniRef100_A8W462 Cluster: SINA3; n... 52 6e-06
>gnl|LJGI|TC66464 homologue to UniRef100_A8W461 Cluster: SINA2; n=1; Medicago
truncatula|Rep: SINA2 - Medicago truncatula (Barrel
medic), partial (89%)
Length = 1460
Score = 1818 bits (917), Expect = 0.0
Identities = 920/921 (99%)
Strand = Plus / Plus
Query: 1 atggaatcaattagcattgatagcactgtgactatgatggaagaagatgagcatcctcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 atggaatcaattagcattgatagcactgtgactatgatggaagaagatgagcatcctcat 422
Query: 61 cagttttcttcaacctccaagctacataacattggtcctgccaccaccagtgttcatgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 cagttttcttcaacctccaagctacataacattggtcctgccaccaccagtgttcatgac 482
Query: 121 cttcttgaatgccccgtttgcacaaattcgatgtaccctccaatccatcagtgtcacaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 cttcttgaatgccccgtttgcacaaattcgatgtaccctccaatccatcagtgtcacaat 542
Query: 181 ggacacaccctttgttcaacatgtaagacaagggtgcacaaccgatgcccaacttgcagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ggacacaccctttgttcaacatgtaagacaagggtgcacaaccgatgcccaacttgcagg 602
Query: 241 caggagctcggtgatatcaggtgtctggcactggagaagatagcagagtcactggaactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 caggagctcggtgatatcaggtgtctggcactggagaagatagcagagtcactggaactg 662
Query: 301 ccttgcagatacatctctcttgggtgtccagagatatttccctactacagcaagctcaaa 360
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 ccttgcagatacatctcccttgggtgtccagagatatttccctactacagcaagctcaaa 722
Query: 361 cacgaggctgtttgtaacttcagaccgtacaactgcccttatgccggatcagactgctct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 cacgaggctgtttgtaacttcagaccgtacaactgcccttatgccggatcagactgctct 782
Query: 421 gttgttggtgatattccataccttgttggtcatttaagggatgaccacagggttgatatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 gttgttggtgatattccataccttgttggtcatttaagggatgaccacagggttgatatg 842
Query: 481 cattctggatgcacttttaaccatcgttatgtcaagtccaatcccatggaagtagaaaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 cattctggatgcacttttaaccatcgttatgtcaagtccaatcccatggaagtagaaaat 902
Query: 541 gctacatggatgctaacggttttccattgctttggtcagtatttttgcctccattttgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 gctacatggatgctaacggttttccattgctttggtcagtatttttgcctccattttgaa 962
Query: 601 gccttccagctcggtacagctcctgtttacatggcattccttcggttcatgggagacgaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963 gccttccagctcggtacagctcctgtttacatggcattccttcggttcatgggagacgaa 1022
Query: 661 agagaggcccggaactacagctatagcttggaggttggaggcaatggacgtaaacttact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1023 agagaggcccggaactacagctatagcttggaggttggaggcaatggacgtaaacttact 1082
Query: 721 tttgaggggagtccaagaagcattagagatagccataagaaagtgagagacagtcatgat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1083 tttgaggggagtccaagaagcattagagatagccataagaaagtgagagacagtcatgat 1142
Query: 781 ggcctcatcatataccgtaacatggcacttttcttctcaggtggggacaggaaagagttg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1143 ggcctcatcatataccgtaacatggcacttttcttctcaggtggggacaggaaagagttg 1202
Query: 841 aagttacgagtaacaggaaggatatggaaagaacagcaaaaccctgaaggtggagtttgc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1203 aagttacgagtaacaggaaggatatggaaagaacagcaaaaccctgaaggtggagtttgc 1262
Query: 901 atgcccaacctgtgtagctag 921
|||||||||||||||||||||
Sbjct: 1263 atgcccaacctgtgtagctag 1283
>gnl|LJGI|TC69704 homologue to UniRef100_A8W464 Cluster: SINA5; n=1; Medicago
truncatula|Rep: SINA5 - Medicago truncatula (Barrel
medic), partial (54%)
Length = 678
Score = 997 bits (503), Expect = 0.0
Identities = 503/503 (100%)
Strand = Plus / Plus
Query: 419 ctgttgttggtgatattccataccttgttggtcatttaagggatgaccacagggttgata 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgttgttggtgatattccataccttgttggtcatttaagggatgaccacagggttgata 60
Query: 479 tgcattctggatgcacttttaaccatcgttatgtcaagtccaatcccatggaagtagaaa 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcattctggatgcacttttaaccatcgttatgtcaagtccaatcccatggaagtagaaa 120
Query: 539 atgctacatggatgctaacggttttccattgctttggtcagtatttttgcctccattttg 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgctacatggatgctaacggttttccattgctttggtcagtatttttgcctccattttg 180
Query: 599 aagccttccagctcggtacagctcctgtttacatggcattccttcggttcatgggagacg 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagccttccagctcggtacagctcctgtttacatggcattccttcggttcatgggagacg 240
Query: 659 aaagagaggcccggaactacagctatagcttggaggttggaggcaatggacgtaaactta 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaagagaggcccggaactacagctatagcttggaggttggaggcaatggacgtaaactta 300
Query: 719 cttttgaggggagtccaagaagcattagagatagccataagaaagtgagagacagtcatg 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttttgaggggagtccaagaagcattagagatagccataagaaagtgagagacagtcatg 360
Query: 779 atggcctcatcatataccgtaacatggcacttttcttctcaggtggggacaggaaagagt 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atggcctcatcatataccgtaacatggcacttttcttctcaggtggggacaggaaagagt 420
Query: 839 tgaagttacgagtaacaggaaggatatggaaagaacagcaaaaccctgaaggtggagttt 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgaagttacgagtaacaggaaggatatggaaagaacagcaaaaccctgaaggtggagttt 480
Query: 899 gcatgcccaacctgtgtagctag 921
|||||||||||||||||||||||
Sbjct: 481 gcatgcccaacctgtgtagctag 503
>gnl|LJGI|TC68066 homologue to UniRef100_A8W463 Cluster: SINA4; n=1; Medicago
truncatula|Rep: SINA4 - Medicago truncatula (Barrel
medic), complete
Length = 1635
Score = 248 bits (125), Expect = 5e-65
Identities = 467/581 (80%)
Strand = Plus / Plus
Query: 127 gaatgccccgtttgcacaaattcgatgtaccctccaatccatcagtgtcacaatggacac 186
|||||||| || || || ||||| |||||||| ||||| |||||||| |||||||| |||
Sbjct: 520 gaatgccctgtatgtaccaattcaatgtacccaccaattcatcagtgccacaatggccac 579
Query: 187 accctttgttcaacatgtaagacaagggtgcacaaccgatgcccaacttgcaggcaggag 246
|| | ||||| || ||||| |||||||||||||||||||| || ||||| || || |||
Sbjct: 580 acattgtgttcgacgtgtaaaacaagggtgcacaaccgatgtcccacttgtagacaagag 639
Query: 247 ctcggtgatatcaggtgtctggcactggagaagatagcagagtcactggaactgccttgc 306
|| || ||||| |||||||| |||||||||||| | || || ||||| || | ||||||
Sbjct: 640 cttggggatattaggtgtctagcactggagaaggtggctgaatcacttgagttaccttgc 699
Query: 307 agatacatctctcttgggtgtccagagatatttccctactacagcaagctcaaacacgag 366
| ||| ||| ||||| |||||||| || ||||| |||||||||||||| || || |||
Sbjct: 700 aagtactactcccttggatgtccagaaatctttccatactacagcaagcttaagcatgag 759
Query: 367 gctgtttgtaacttcagaccgtacaactgcccttatgccggatcagactgctctgttgtt 426
| | || || |||||||| || | || |||||||| ||||| || || ||||||||
Sbjct: 760 acaatatgcaatttcagaccatatagttgtccttatgcgggatccgagtgttctgttgtc 819
Query: 427 ggtgatattccataccttgttggtcatttaagggatgaccacagggttgatatgcattct 486
|| |||||||| | ||| |||| ||| || ||||||||||| | ||| || ||||| |
Sbjct: 820 ggggatattcccttcctcgttgctcacttgagggatgaccataaggtggacatgcacacg 879
Query: 487 ggatgcacttttaaccatcgttatgtcaagtccaatcccatggaagtagaaaatgctaca 546
|||||||| || |||||||||||||| ||||| |||||| |||||||| ||||| ||
Sbjct: 880 ggatgcacgttcaaccatcgttatgtgaagtcaaatccccgtgaagtagagaatgcaacc 939
Query: 547 tggatgctaacggttttccattgctttggtcagtatttttgcctccattttgaagccttc 606
|||||||| || || || ||||| ||||| || ||||| ||||| ||||||||||| |||
Sbjct: 940 tggatgctcacagtatttcattgttttggccaatatttctgcctgcattttgaagctttc 999
Query: 607 cagctcggtacagctcctgtttacatggcattccttcggttcatgggagacgaaagagag 666
||||| || | || || |||||||||||||||||||| |||||||| || || | |||
Sbjct: 1000 cagcttggcatggcccccgtttacatggcattccttcgtttcatgggcgatgagaatgag 1059
Query: 667 gcccggaactacagctatagcttggaggttggaggcaatgg 707
|| ||||| || || |||||| | |||||||| | ||||||
Sbjct: 1060 gctcggaattatagttatagcctagaggttggggccaatgg 1100
>gnl|LJGI|AV778762 similar to UniRef100_A8W464 Cluster: SINA5; n=1; Medicago
truncatula|Rep: SINA5 - Medicago truncatula (Barrel
medic), partial (23%)
Length = 512
Score = 143 bits (72), Expect = 2e-33
Identities = 172/204 (84%), Gaps = 1/204 (0%)
Strand = Plus / Minus
Query: 646 ttcatgggagacgaaagagaggcccggaactacagctatagcttggaggttggaggcaat 705
||||||||||| |||||||| ||| ||| ||||||||| || | ||||||||||| |
Sbjct: 504 ttcatgggagatgaaagagaagccaggagctacagctacagtcttgaggttggaggaagc 445
Query: 706 ggacgtaaacttacttttgaggggagtccaagaagcattagagatagccataagaaagtg 765
|| |||||||| || | |||||| ||||||||||| |||||||||||||| ||| ||||
Sbjct: 444 gggcgtaaactaacatatgagggcagtccaagaagtattagagatagccacaagcaagtt 385
Query: 766 agagacagtcatgatggcctcatcatataccgtaacatggcac-ttttcttctcaggtgg 824
|||||||| ||||| ||||| | | | ||||||||||||| ||||||||||||||||
Sbjct: 384 agagacagccatgacggccttgttgtgcatcgtaacatggcacattttcttctcaggtgg 325
Query: 825 ggacaggaaagagttgaagttacg 848
||| || |||||||||||||||||
Sbjct: 324 ggatagtaaagagttgaagttacg 301
>gnl|LJGI|TC62546 similar to UniRef100_Q9XGC3 Cluster: SINA2p; n=1; Vitis
vinifera|Rep: SINA2p - Vitis vinifera (Grape), partial
(89%)
Length = 1323
Score = 56.0 bits (28), Expect = 4e-07
Identities = 84/100 (84%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 459 ggatgaccacagggttgatatgcattctggatgcacttttaaccatcgttatgtcaagtc 518
|||||| |||| |||||| |||||| ||||||||| || || ||||| |||||||| ||
Sbjct: 755 ggatgatcacaaggttgacatgcatgatggatgcaccttcaatcatcgatatgtcaaatc 814
Query: 519 caatcc-catggaagtagaaaatgctacatggatgctaac 557
||||| |||| |||| || ||||| ||||||||||||||
Sbjct: 815 aaatccacatg-aagttgagaatgccacatggatgctaac 853
>gnl|LJGI|TC78090 homologue to UniRef100_A8W462 Cluster: SINA3; n=1; Medicago
truncatula|Rep: SINA3 - Medicago truncatula (Barrel
medic), partial (38%)
Length = 555
Score = 52.0 bits (26), Expect = 6e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 799 aacatggcacttttcttctcaggtggggacaggaaagagttgaagttacgagtaacagga 858
||||||||||| ||||| ||||| || ||| |||| || ||||| | ||||| ||||||
Sbjct: 272 aacatggcactcttcttttcagggggtgaccggaaggaattgaaactgcgagttacagga 331
Query: 859 aggatatggaaagaacag 876
||||| ||||| ||||||
Sbjct: 332 aggatttggaaggaacag 349