Miyakogusa Predicted Gene

Lj3g3v2441840.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2441840.2 Non Chatacterized Hit- tr|I1KHV6|I1KHV6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25262
PE,82.73,0,zf-HC5HC2H_2,NULL; SET,SET domain; PHD,Zinc finger,
PHD-finger; PHD_2,NULL; no description,Zinc fing,CUFF.44010.2
         (2277 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC597032 similar to UniRef100_A7PZX4 Cluster: Chromosom...   652   0.0  
gnl|LJGI|TC75232 similar to UniRef100_UPI00015057FC Cluster: DNA...   438   e-122
gnl|LJGI|DC597924                                                     145   1e-33

>gnl|LJGI|DC597032 similar to UniRef100_A7PZX4 Cluster: Chromosome chr15 scaffold_40,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr15 scaffold_40, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (3%)
          Length = 340

 Score =  652 bits (329), Expect = 0.0
 Identities = 339/341 (99%), Gaps = 1/341 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1530 cggaacttcaattcacaatcatcagggatgcttcaggggatcaaggctggtttcatcaaa 1589
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    cggaacttcaattcacaatcatcagggatgcttcaggggatcaaggctggtttcatcaaa 60

                                                                        
Query: 1590 gagggtagagcttaatgaatcttcaaccactgaaaatgacatggttgaaccactgtctgc 1649
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   gagggtagagcttaatgaatcttcaaccactgaaaatgacatggttgaaccactgtctgc 120

                                                                        
Query: 1650 tgccagatgtcgggtgtacagaaggtctactaataagagggctgacgtgccaataattca 1709
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  tgccagatgtcgggtgtacagaaggtctactaataagagggctgacgtgccaataattca 180

                                                                        
Query: 1710 cttgctgagaggaccgagccttcattgtttaggtgaaataactcaattgaacagctgtaa 1769
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  cttgctgagaggaccgagccttcattgtttaggtgaaataactcaattgaacagctgtaa 240

                                                                        
Query: 1770 ggatgctgaagattctaaagttttcacttcatttaaggaacgtcttcatcatttgcagaa 1829
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  ggatgctgaagattctaaagttttcacttcatttaaggaacgtcttcatcatttgcagaa 300

                                                     
Query: 1830 aatggaaaaactaagagtttgcttcggaaaatcgggtattc 1870
            ||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 301  aatgg-aaaactaagagtttgcttcagaaaatcgggtattc 340


>gnl|LJGI|TC75232 similar to UniRef100_UPI00015057FC Cluster: DNA binding; n=1;
            Arabidopsis thaliana|Rep: DNA binding - Arabidopsis
            thaliana, partial (7%)
          Length = 543

 Score =  438 bits (221), Expect = e-122
 Identities = 232/236 (98%)
 Strand = Plus / Plus

                                                                        
Query: 2042 catatcagggcaatatagcacgtttgataaaccattcctgcatgccaaactgctatgcaa 2101
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1    catatcagggcaatatagcacgtttgataaaccattcctgcatgccnaactgctatgcaa 60

                                                                        
Query: 2102 ggattatgagtttgggtgatcaagaggaagagagccggatcgttctcattgccaaaacca 2161
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| 
Sbjct: 61   ggattatgagtttgggtgatcaagaggaagagagccggatcgttctcattgcccaaaccc 120

                                                                        
Query: 2162 atgtttctgctggtgaagaactaacgtatgattacaagttcgaagtagatgagcgggaag 2221
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  atgtttctgctggtgaagaactaacgtatgattacaagttcgaagtagatgagcgggaag 180

                                                                    
Query: 2222 aacaaaaagttccttgtctttgcaaagcctccaattgcagaaaatatatgaactag 2277
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  aaccaaaagttccttgtctttgcaaagcctccaattgcagaaaatatatgaactag 236



 Score = 69.9 bits (35), Expect = 7e-11
 Identities = 38/39 (97%)
 Strand = Plus / Plus

                                                   
Query: 2239 ctttgcaaagcctccaattgcagaaaatatatgaactag 2277
            |||||||||||||||||||||||||||| ||||||||||
Sbjct: 254  ctttgcaaagcctccaattgcagaaaatttatgaactag 292


>gnl|LJGI|DC597924 
          Length = 563

 Score =  145 bits (73), Expect = 1e-33
 Identities = 97/105 (92%)
 Strand = Plus / Plus

                                                                       
Query: 292 gatgcaagatattgttcgggctgtggtttgttgttgccatgcaaaaccatgaagaagatt 351
           |||||||||||||||   ||||| ||||||| ||||||||||||||||||||||||||| 
Sbjct: 159 gatgcaagatattgtggtggctgcggtttgtcgttgccatgcaaaaccatgaagaagatc 218

                                                        
Query: 352 aaggattcaagtcacacacctcaattttattgcaaacattgtgct 396
           ||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 219 aaggattcaagtcacacacctcaatttcattgcaaacactgtgct 263