Miyakogusa Predicted Gene
- Lj3g3v2439650.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2439650.1 Non Chatacterized Hit- tr|I1KHW2|I1KHW2_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,77.56,0,DEAD,DNA/RNA
helicase, DEAD/DEAH box type, N-terminal; Helicase_C,Helicase,
C-terminal; P-loop conta,CUFF.44036.1
(2079 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73020 similar to UniRef100_Q8TFG9 Cluster: Uncharacte... 979 0.0
gnl|LJGI|TC57772 similar to UniRef100_A7PZU7 Cluster: Chromosome... 979 0.0
gnl|LJGI|TC68142 similar to UniRef100_A7PZU7 Cluster: Chromosome... 975 0.0
gnl|LJGI|AV767433 homologue to UniRef100_A7PZU7 Cluster: Chromos... 749 0.0
>gnl|LJGI|TC73020 similar to UniRef100_Q8TFG9 Cluster: Uncharacterized
serine/threonine-rich protein PB15E9.01c precursor; n=1;
Schizosaccharomyces pombe|Rep: Uncharacterized
serine/threonine-rich protein PB15E9.01c precursor -
Schizosaccharomyces pombe (Fission yeast), partial (4%)
Length = 697
Score = 979 bits (494), Expect = 0.0
Identities = 494/494 (100%)
Strand = Plus / Plus
Query: 1 atgcctacaaagctgctcctcttatcccaactccgtgtcctccaacccatgaagaatcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 atgcctacaaagctgctcctcttatcccaactccgtgtcctccaacccatgaagaatcct 182
Query: 61 ctcttctcccgaaccttcctcacccctttcaaattctcccacctctacctccgcaacgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ctcttctcccgaaccttcctcacccctttcaaattctcccacctctacctccgcaacgca 242
Query: 121 gcgtttaacccccgccccttctccgcccgcgccgccggtagcagcagggagcagctccgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gcgtttaacccccgccccttctccgcccgcgccgccggtagcagcagggagcagctccgc 302
Query: 181 ccttccaagagcaagagcctcgtcgatgacgaggccgagctcagcgactgggtcgatgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ccttccaagagcaagagcctcgtcgatgacgaggccgagctcagcgactgggtcgatgag 362
Query: 241 ctccgcactggtcggaccgactccttcgccccccggagggtcagcgaggatggtggtgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ctccgcactggtcggaccgactccttcgccccccggagggtcagcgaggatggtggtgtg 422
Query: 301 gaacggcgtgagtttgcgccgagggggaataccagggcgccgaagaggaagggtgaggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gaacggcgtgagtttgcgccgagggggaataccagggcgccgaagaggaagggtgaggat 482
Query: 361 ttgaggagagggaggcagaatggtggtaacgccaggaggaagtttgcgttgagtggggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ttgaggagagggaggcagaatggtggtaacgccaggaggaagtttgcgttgagtggggat 542
Query: 421 gatgaggataaggatgacgtggcggggaggaagttcaaggttggtggtggtggtagcatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gatgaggataaggatgacgtggcggggaggaagttcaaggttggtggtggtggtagcatt 602
Query: 481 gggcagtttctcag 494
||||||||||||||
Sbjct: 603 gggcagtttctcag 616
>gnl|LJGI|TC57772 similar to UniRef100_A7PZU7 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 812
Score = 979 bits (494), Expect = 0.0
Identities = 494/494 (100%)
Strand = Plus / Plus
Query: 1 atgcctacaaagctgctcctcttatcccaactccgtgtcctccaacccatgaagaatcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 atgcctacaaagctgctcctcttatcccaactccgtgtcctccaacccatgaagaatcct 135
Query: 61 ctcttctcccgaaccttcctcacccctttcaaattctcccacctctacctccgcaacgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 ctcttctcccgaaccttcctcacccctttcaaattctcccacctctacctccgcaacgca 195
Query: 121 gcgtttaacccccgccccttctccgcccgcgccgccggtagcagcagggagcagctccgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gcgtttaacccccgccccttctccgcccgcgccgccggtagcagcagggagcagctccgc 255
Query: 181 ccttccaagagcaagagcctcgtcgatgacgaggccgagctcagcgactgggtcgatgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ccttccaagagcaagagcctcgtcgatgacgaggccgagctcagcgactgggtcgatgag 315
Query: 241 ctccgcactggtcggaccgactccttcgccccccggagggtcagcgaggatggtggtgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ctccgcactggtcggaccgactccttcgccccccggagggtcagcgaggatggtggtgtg 375
Query: 301 gaacggcgtgagtttgcgccgagggggaataccagggcgccgaagaggaagggtgaggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gaacggcgtgagtttgcgccgagggggaataccagggcgccgaagaggaagggtgaggat 435
Query: 361 ttgaggagagggaggcagaatggtggtaacgccaggaggaagtttgcgttgagtggggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ttgaggagagggaggcagaatggtggtaacgccaggaggaagtttgcgttgagtggggat 495
Query: 421 gatgaggataaggatgacgtggcggggaggaagttcaaggttggtggtggtggtagcatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gatgaggataaggatgacgtggcggggaggaagttcaaggttggtggtggtggtagcatt 555
Query: 481 gggcagtttctcag 494
||||||||||||||
Sbjct: 556 gggcagtttctcag 569
Score = 345 bits (174), Expect = 7e-94
Identities = 174/174 (100%)
Strand = Plus / Plus
Query: 558 attgaacaagagtagaactgctttgtttgctcagaagaagagtgctgtgcctgtaccaac 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 attgaacaagagtagaactgctttgtttgctcagaagaagagtgctgtgcctgtaccaac 698
Query: 618 tccaagaccttcttcatcttctgggtctgggtctgattcttatttgagtgaaaccagatt 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 tccaagaccttcttcatcttctgggtctgggtctgattcttatttgagtgaaaccagatt 758
Query: 678 tgaccaatgttcggtctccccgctgtcactgaaaggagtcaaggatgctgggta 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 tgaccaatgttcggtctccccgctgtcactgaaaggagtcaaggatgctgggta 812
>gnl|LJGI|TC68142 similar to UniRef100_A7PZU7 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 741
Score = 975 bits (492), Expect = 0.0
Identities = 501/504 (99%)
Strand = Plus / Plus
Query: 1576 gaggaatttcggaagtcaaagggtctcatccttgttacttcagatgtctctgcacgtggt 1635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggaatttcggaagtcaaagggtctcatccttgttacttcagatgtctctgcacgtggt 60
Query: 1636 gtagattatccagatgttacacttgttgtacaggttggtttaccatctgatagagaacag 1695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtagattatccagatgttacacttgttgtacaggttggtttaccatctgatagagaacag 120
Query: 1696 tatatacatcgactcggaagaacagggcgaagagggaaagaagggcaaggcatactgcta 1755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tatatacatcgactcggaagaacagggcgaagagggaaagaagggcaaggcatactgcta 180
Query: 1756 ctgactccttgggaagagttctttttatctaccataaaagatttgcctattgagaaagct 1815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctgactccttgggaagagttctttttatctaccataaaagatttgcctattgagaaagct 240
Query: 1816 ccagtaccttcagttgatcctgacactaagagaaaggtggaaaaggctctatcgcatgta 1875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccagtaccttcagttgatcctgacactaagagaaaggtggaaaaggctctatcgcatgta 300
Query: 1876 gagatgaagaataaagaagcagcatatcaggcatggcttggttactacaattccaacaag 1935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gagatgaagaataaagaagcagcatatcaggcatggcttggttactacaattccaacaag 360
Query: 1936 aaaattgggaaagacaagtataggctagtggagcttgcaaatgaggtcagtaaaagcatg 1995
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 361 aaaattgggaaagacaagtataggctagtggagcttgcaaatgagttcagtaaaagcatg 420
Query: 1996 gggcttgataaacccccagctattcctaaactcgttcttggtaagatgggtcttagaaat 2055
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gggcttgataaccctccagctattcctaaactcgttcttggtaagatgggtcttagaaat 480
Query: 2056 atccctggtttacgttccaagtag 2079
||||||||||||||||||||||||
Sbjct: 481 atccctggtttacgttccaagtag 504
>gnl|LJGI|AV767433 homologue to UniRef100_A7PZU7 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 383
Score = 749 bits (378), Expect = 0.0
Identities = 378/378 (100%)
Strand = Plus / Plus
Query: 1030 gaacagaaacgcatgcaagtaaacccttgccagatccttgttgctacacctggaaggctt 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 gaacagaaacgcatgcaagtaaacccttgccagatccttgttgctacacctggaaggctt 65
Query: 1090 agggatcatgttgagaatactgctggttttgcatctaggcttatgggtgttaaggtcttg 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 agggatcatgttgagaatactgctggttttgcatctaggcttatgggtgttaaggtcttg 125
Query: 1150 attcttgatgaagctgatcatttactagacatgggatttcgtaaagatattgagaaaata 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 attcttgatgaagctgatcatttactagacatgggatttcgtaaagatattgagaaaata 185
Query: 1210 attgctgctgtccctaaacaacgacaaacccttctgttttctgccaccgttcctgaagag 1269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 attgctgctgtccctaaacaacgacaaacccttctgttttctgccaccgttcctgaagag 245
Query: 1270 gtgcgtcaagtctgtaatattgctttgagaagggatcatgaatttattaatacagttcaa 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gtgcgtcaagtctgtaatattgctttgagaagggatcatgaatttattaatacagttcaa 305
Query: 1330 gagggtagtgaggagacacattcacaggtccgccagatgcatttagttgcccctttagac 1389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gagggtagtgaggagacacattcacaggtccgccagatgcatttagttgcccctttagac 365
Query: 1390 aagcatttctctttactc 1407
||||||||||||||||||
Sbjct: 366 aagcatttctctttactc 383