Miyakogusa Predicted Gene
- Lj3g3v2416350.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2416350.1 Non Chatacterized Hit- tr|I1KHX6|I1KHX6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.17213
PE,60.79,0,seg,NULL; coiled-coil,NULL; DUF3133,Protein of unknown
function DUF3133; SUBFAMILY NOT NAMED,NULL; F,CUFF.43990.1
(2526 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81713 similar to UniRef100_A7PZS8 Cluster: Chromosome... 1917 0.0
gnl|LJGI|BP041887 597 e-169
gnl|LJGI|TC73158 similar to UniRef100_A7QNA6 Cluster: Chromosome... 119 9e-26
gnl|LJGI|FS345552 similar to UniRef100_A7QNA6 Cluster: Chromosom... 70 7e-11
>gnl|LJGI|TC81713 similar to UniRef100_A7PZS8 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 1055
Score = 1917 bits (967), Expect = 0.0
Identities = 992/999 (99%), Gaps = 1/999 (0%)
Strand = Plus / Plus
Query: 1 atggaggactcaggcaagctccgattggtggggtgccccaattgtcaaaacctccttcct 60
||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 57 atggaggactcagccaagctccgattggtgcggtgccccaattgtcaaaacctccttcct 116
Query: 61 gagcttgctgattactctgtttacaaatgtggtggttgtggtgctgttcttagagcgggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 gagcttgctgattactctgtttacaaatgtggtggttgtggtgctgttcttagagcgggg 176
Query: 121 cttaatggttatggaaatggtagcttgtgggagatttcagatgagggacagggtggagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 cttaatggttatggaaatggtagcttgtgggagatttcagatgagggacagggtggagga 236
Query: 181 ggtcttgctaaatcaggaaaatccttggggaaaggggtagttgatttgagtgataattca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 ggtcttgctaaatcaggaaaatccttggggaaaggggtagttgatttgagtgataattca 296
Query: 241 gatattgatgttaagtcaaatggtggttcgtcagggaaacaaaataatggacatgtaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gatattgatgttaagtcaaatggtggttcgtcagggaaacaaaataatggacatgtaagg 356
Query: 301 attctgaatcattttgaggatggtgatgaggaaggggttttggagaatggatttgatgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 attctgaatcattttgaggatggtgatgaggaaggggttttggagaatggatttgatgtt 416
Query: 361 aataggaaccaagatagatggggtaaatcattaggaaaagagcagcaagaacacaattct 420
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 417 aataggaaccaagatagatggggtaaatcattaggaaaagagcagcgagaacacaattct 476
Query: 421 cgaatgggagggtccaaattctccgtgagaaggtctgagagacgtgaggtggaggaa-tt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 477 cgaatgggagggtccaaattctccgtgagaaggtctgagagacgtgaggtggaggaaatt 536
Query: 480 ttggagaaagccatcagctgatatggaaggtgtgagattttccaatttgaactatcctga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 ttggagaaagccatcagctgatatggaaggtgtgagattttccaatttgaactatcctga 596
Query: 540 tgaaggaacttcaaatggctattccagttcttcttacaagtatggggaacaatggaggga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 tgaaggaacttcaaatggctattccagttcttcttacaagtatggggaacaatggaggga 656
Query: 600 ttataaagacatggatggagtgagcaaggttcagcaccttgagcaagatagagctgatct 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 ttataaagacatggatggagtgagcaaggttcagcaccttgagcaagatagagctgatct 716
Query: 660 tctaaggaagctggaagagttatccatgcatctgaacaagtcttctgaaatggttaataa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 tctaaggaagctggaagagttatccatgcatctgaacaagtcttctgaaatggttaataa 776
Query: 720 acctaaagaaaaggttcttccggatggaaaggtggttcctccaggtccttacaatggccc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 acctaaagaaaaggttcttccggatggaaaggtggttcctccaggtccttacaatggccc 836
Query: 780 tgatgcttggtttcgagatggaccgtcagggttgaacaggacctcaaggcaattcattga 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 tgatgcttggtttcgagatggaccgtcagggttgaacaggacctcaaggcaattcattga 896
Query: 840 ccctaataaacatatggcaaattcccctgatttcaattactatcatgatccatatgctta 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 ccctaataaacatatggcaaattcccctgatttcaattactatcatgatccatatgctta 956
Query: 900 taatacaaatggtcatgaaagagccatgtttgacttccatccttcaatccctaacccagt 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 taatacaaatggtcatgaaagagccatgtttgacttccatccttcaatccctaacccaag 1016
Query: 960 ttttattcctggatatggggttcctttcatgtcgccaat 998
|||||||||||||||||||| ||||||||||||||||||
Sbjct: 1017 ttttattcctggatatggggatcctttcatgtcgccaat 1055
>gnl|LJGI|BP041887
Length = 332
Score = 597 bits (301), Expect = e-169
Identities = 313/316 (99%), Gaps = 2/316 (0%)
Strand = Plus / Plus
Query: 967 cctggatatggggttcctttcatgtcgccaatgatgagaggtccgcatccgttaccacat 1026
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 cctggatatgggat--ctttcatgtcgccaatgatgagaggtccgcatccgttaccacat 76
Query: 1027 cagttccggcaacagccaattcatccctactttcccggccattatgctgatggtccagat 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 cagttccggcaacagccaattcatccctactttcccggccattatgctgatggtccagat 136
Query: 1087 tcatatggaccatatgcacatcgtgctatgcctcacccgcattcttgctcttgttttcat 1146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 tcatatggaccatatgcacatcgtgctatgcctcacccgcattcttgctcttgttttcat 196
Query: 1147 tgctatgaaaacaaaagaagaggttcagtgccagcaccacctgctggagtcattaacagc 1206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tgctatgaaaacaaaagaagaggttcagtgccagcaccacctgctggagtcattaacagc 256
Query: 1207 agattcgctcgtggcacgaatgatcctatggtataccatcatgagatcccgggggctgtt 1266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 agattcgctcgtggcacgaatgatcctatggtataccatcatgagatcccgggggctgtt 316
Query: 1267 ggtccacagattcata 1282
||||||||||||||||
Sbjct: 317 ggtccacagattcata 332
>gnl|LJGI|TC73158 similar to UniRef100_A7QNA6 Cluster: Chromosome chr2 scaffold_132,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_132, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 743
Score = 119 bits (60), Expect = 9e-26
Identities = 117/136 (86%)
Strand = Plus / Plus
Query: 2357 ggtatgattttcgggctggattttggggtgtcatgggtgaaccgtgtcttggaataattc 2416
|||||||| |||| ||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 65 ggtatgatattcgagctggattttggggtgtcatgggtgggccttgtcttggaataattc 124
Query: 2417 catcacacatagaagagttcaattatcccatgccagataaatgtgctgctggaaatactg 2476
|| || ||||||||||||||| | |||||||| || |||||| ||| ||| | |||||
Sbjct: 125 caccatttatagaagagttcaatcaccccatgccggacaaatgttctggtgggagtactg 184
Query: 2477 gcgtttttgtgaatgg 2492
| |||||||| |||||
Sbjct: 185 gtgtttttgtaaatgg 200
>gnl|LJGI|FS345552 similar to UniRef100_A7QNA6 Cluster: Chromosome chr2 scaffold_132,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_132, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 519
Score = 69.9 bits (35), Expect = 7e-11
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 2492 ggtggagaaagcaaagaaaggatttggcatgagag 2526
|||||||||||||||||||||||||||||||||||
Sbjct: 356 ggtggagaaagcaaagaaaggatttggcatgagag 322