Miyakogusa Predicted Gene

Lj3g3v2414270.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2414270.1 CUFF.43975.1
         (3150 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO013554                                                     412   e-114

>gnl|LJGI|GO013554 
          Length = 923

 Score =  412 bits (208), Expect = e-114
 Identities = 253/260 (97%), Gaps = 6/260 (2%)
 Strand = Plus / Minus

                                                                        
Query: 2891 agaattttgtaggtttatctgttttggatggatatattgcatgtggctcagagtctaatg 2950
            |||||||||||| ||||||||||||| ||| |||||| ||||||||||||||||||||||
Sbjct: 923  agaattttgtagttttatctgttttg-atg-atatat-gcatgtggctcagagtctaatg 867

                                                                        
Query: 2951 aggttttctgttaccacaaatctctgccagtgccaattgcttctcacaaatttgagtcaa 3010
            |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 866  aggttt-ctgttaccacaa-tctctgccagtgccaattgcttctcacaaatttgagtcaa 809

                                                                        
Query: 3011 tggatcccatttctggtcattcaaatagtggcgataacactggacagtttgtttctagtg 3070
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808  tggatcccatttctggtcattcaaatagtggcgataacactggacagtttgtttctagtg 749

                                                                        
Query: 3071 tctgctggagaaagaagtctaacatgctagttgctgccaactcagtgggaattgtgaaac 3130
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748  tctgctgga-aaagaagtctaacatgctagttgctgccaactcagtgggaattgtgaaac 690

                                
Query: 3131 tattgcagatggtctgacaa 3150
            ||||||||||||||||||||
Sbjct: 689  tattgcagatggtctgacaa 670