Miyakogusa Predicted Gene
- Lj3g3v2400840.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2400840.1 tr|A9T9H6|A9T9H6_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_168781,26.19,1e-17,seg,NULL,CUFF.43985.1
(1269 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66722 similar to UniRef100_A7P8V0 Cluster: Chromosome... 1269 0.0
gnl|LJGI|TC60121 weakly similar to UniRef100_A7PMI6 Cluster: Chr... 811 0.0
>gnl|LJGI|TC66722 similar to UniRef100_A7P8V0 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (10%)
Length = 937
Score = 1269 bits (640), Expect = 0.0
Identities = 646/648 (99%)
Strand = Plus / Plus
Query: 622 gcacttccactattaaattatgactgtgcaattaacaatgaagctcagcgcaatttccaa 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcacttccactattaaattatgactgtgcaattaacaatgaagctcagcgcaatttccaa 60
Query: 682 gatgaatacactagctggaacagcggcggcgcatttggtttaccacaaactgcacctcca 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatgaatacactagctggaacagcggcggcgcatttggtttaccacaaactgcacctcca 120
Query: 742 gactatgaagataatttatatgctagttggctgggaaatggcaataatgaagctgatatg 801
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 121 gactatgaagataatttatatgctagttggctgggaaatggcaataatgaggctgatatg 180
Query: 802 tcattggctaaagaggcagaacacaccaaaaggccttctgaagcttgcagagataatgac 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcattggctaaagaggcagaacacaccaaaaggccttctgaagcttgcagagataatgac 240
Query: 862 cccaaagtgctttctgcaaacctgtcctctgacaccatcatccaagagaggagtgagatg 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cccaaagtgctttctgcaaacctgtcctctgacaccatcatccaagagaggagtgagatg 300
Query: 922 gcacctgagactgccaccggcaaagatgttgaaatgaggaccgaggagggtgcgttcagt 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcacctgagactgccaccggcaaagatgttgaaatgaggaccgaggagggtgcgttcagt 360
Query: 982 ttcatgtcaggtcaacccggagattctacggtgctatttaaagaacccgtctcttgcacc 1041
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 361 ttcatgtcaggtcaacccggagattctacggtgctatttaaagaccccgtctcttgcacc 420
Query: 1042 acaagcatccctgacattgacgctcacttcggtgctgtagctactgagatatctgagagg 1101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acaagcatccctgacattgacgctcacttcggtgctgtagctactgagatatctgagagg 480
Query: 1102 gttgtttctgacagtgccatgcctgataggaacagttcattgataggaacatcagactcc 1161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gttgtttctgacagtgccatgcctgataggaacagttcattgataggaacatcagactcc 540
Query: 1162 aaaaggaccagggaatttgcatttaaattagattatggcagctcagaggctgaggatgat 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaaaggaccagggaatttgcatttaaattagattatggcagctcagaggctgaggatgat 600
Query: 1222 ccttttcctgctattgtggatgcagacccagatacagactctgaataa 1269
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ccttttcctgctattgtggatgcagacccagatacagactctgaataa 648
>gnl|LJGI|TC60121 weakly similar to UniRef100_A7PMI6 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 753
Score = 811 bits (409), Expect = 0.0
Identities = 412/413 (99%)
Strand = Plus / Plus
Query: 1 atgggtgttggaatagctatgtacctcgagcaggaagttgtcaacaatgctattgctgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 atgggtgttggaatagctatgtacctcgagcaggaagttgtcaacaatgctattgctgat 400
Query: 61 ctgagcaccattaagaataagaatagtgtcacattgaatggttcaaattcagacgtctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ctgagcaccattaagaataagaatagtgtcacattgaatggttcaaattcagacgtctct 460
Query: 121 gttagagtgccaccaccaacaaatcatagaaaaaggaagcatagcagtaatgctgggtct 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gttagagtgccgccaccaacaaatcatagaaaaaggaagcatagcagtaatgctgggtct 520
Query: 181 cttcaggagcatgtcgaaagtgttggtttaggagtgaaagatcccaagaaccgtccacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 cttcaggagcatgtcgaaagtgttggtttaggagtgaaagatcccaagaaccgtccacta 580
Query: 241 actccaatttctctgaggatagctgcactcgaggcattagaagctcttgttactgtggct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 actccaatttctctgaggatagctgcactcgaggcattagaagctcttgttactgtggct 640
Query: 301 ggtgctttaagatctgaacggtggagacaaaaagttgatagtcttttgatggacatagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ggtgctttaagatctgaacggtggagacaaaaagttgatagtcttttgatggacatagca 700
Query: 361 aatgattctttcaaagaaggaccatctagtgaagaaataagtgtgcttcagca 413
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 aatgattctttcaaagaaggaccatctagtgaagaaataagtgtgcttcagca 753