Miyakogusa Predicted Gene
- Lj3g3v2387580.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2387580.1 Non Chatacterized Hit- tr|J3L5J0|J3L5J0_ORYBR
Uncharacterized protein OS=Oryza brachyantha GN=OB01G4,52.13,4e-19,
,CUFF.43951.1
(360 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66757 similar to UniRef100_A7QYJ1 Cluster: Chromosome... 714 0.0
gnl|LJGI|FS319757 similar to UniRef100_A7QYJ1 Cluster: Chromosom... 321 2e-87
>gnl|LJGI|TC66757 similar to UniRef100_A7QYJ1 Cluster: Chromosome undetermined
scaffold_248, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_248,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (32%)
Length = 784
Score = 714 bits (360), Expect = 0.0
Identities = 360/360 (100%)
Strand = Plus / Plus
Query: 1 atgtcacaagctgatgtctcttactgttgtggctcttgtggatatcctctgaacttgaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 atgtcacaagctgatgtctcttactgttgtggctcttgtggatatcctctgaacttgaca 199
Query: 61 tcctcaaatcgaatcacatctaacattgcatctgaatataagagatctgttaaaaaggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tcctcaaatcgaatcacatctaacattgcatctgaatataagagatctgttaaaaaggga 259
Query: 121 tcaatctcttttgcttcagttgatctcagccgatttacacaggttgatgaaataagttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tcaatctcttttgcttcagttgatctcagccgatttacacaggttgatgaaataagttgt 319
Query: 181 ttccctgtctcatggtttaattcttcaaagactaaactgctttgccgcaaatgtggggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttccctgtctcatggtttaattcttcaaagactaaactgctttgccgcaaatgtggggtt 379
Query: 241 catattggttatggttactgtagagaatcacctgctctttgtggacttgagccttccgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 catattggttatggttactgtagagaatcacctgctctttgtggacttgagccttccgtt 439
Query: 301 tcatctagctctcagggaaaattcatcataaagattcgatctctacagccttcagaagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcatctagctctcagggaaaattcatcataaagattcgatctctacagccttcagaagag 499
>gnl|LJGI|FS319757 similar to UniRef100_A7QYJ1 Cluster: Chromosome undetermined
scaffold_248, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_248,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (29%)
Length = 742
Score = 321 bits (162), Expect = 2e-87
Identities = 162/162 (100%)
Strand = Plus / Plus
Query: 1 atgtcacaagctgatgtctcttactgttgtggctcttgtggatatcctctgaacttgaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 atgtcacaagctgatgtctcttactgttgtggctcttgtggatatcctctgaacttgaca 218
Query: 61 tcctcaaatcgaatcacatctaacattgcatctgaatataagagatctgttaaaaaggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 tcctcaaatcgaatcacatctaacattgcatctgaatataagagatctgttaaaaaggga 278
Query: 121 tcaatctcttttgcttcagttgatctcagccgatttacacag 162
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tcaatctcttttgcttcagttgatctcagccgatttacacag 320
Score = 196 bits (99), Expect = 7e-50
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 262 agagaatcacctgctctttgtggacttgagccttccgtttcatctagctctcagggaaaa 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 agagaatcacctgctctttgtggacttgagccttccgtttcatctagctctcagggaaaa 378
Query: 322 ttcatcataaagattcgatctctacagccttcagaagag 360
|||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ttcatcataaagattcgatctctacagccttcagaagag 417