Miyakogusa Predicted Gene

Lj3g3v2387580.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2387580.1 Non Chatacterized Hit- tr|J3L5J0|J3L5J0_ORYBR
Uncharacterized protein OS=Oryza brachyantha GN=OB01G4,52.13,4e-19,
,CUFF.43951.1
         (360 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66757 similar to UniRef100_A7QYJ1 Cluster: Chromosome...   714   0.0  
gnl|LJGI|FS319757 similar to UniRef100_A7QYJ1 Cluster: Chromosom...   321   2e-87

>gnl|LJGI|TC66757 similar to UniRef100_A7QYJ1 Cluster: Chromosome undetermined
           scaffold_248, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_248,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (32%)
          Length = 784

 Score =  714 bits (360), Expect = 0.0
 Identities = 360/360 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcacaagctgatgtctcttactgttgtggctcttgtggatatcctctgaacttgaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 atgtcacaagctgatgtctcttactgttgtggctcttgtggatatcctctgaacttgaca 199

                                                                       
Query: 61  tcctcaaatcgaatcacatctaacattgcatctgaatataagagatctgttaaaaaggga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tcctcaaatcgaatcacatctaacattgcatctgaatataagagatctgttaaaaaggga 259

                                                                       
Query: 121 tcaatctcttttgcttcagttgatctcagccgatttacacaggttgatgaaataagttgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tcaatctcttttgcttcagttgatctcagccgatttacacaggttgatgaaataagttgt 319

                                                                       
Query: 181 ttccctgtctcatggtttaattcttcaaagactaaactgctttgccgcaaatgtggggtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttccctgtctcatggtttaattcttcaaagactaaactgctttgccgcaaatgtggggtt 379

                                                                       
Query: 241 catattggttatggttactgtagagaatcacctgctctttgtggacttgagccttccgtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 catattggttatggttactgtagagaatcacctgctctttgtggacttgagccttccgtt 439

                                                                       
Query: 301 tcatctagctctcagggaaaattcatcataaagattcgatctctacagccttcagaagag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcatctagctctcagggaaaattcatcataaagattcgatctctacagccttcagaagag 499


>gnl|LJGI|FS319757 similar to UniRef100_A7QYJ1 Cluster: Chromosome undetermined
           scaffold_248, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_248,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (29%)
          Length = 742

 Score =  321 bits (162), Expect = 2e-87
 Identities = 162/162 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcacaagctgatgtctcttactgttgtggctcttgtggatatcctctgaacttgaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 atgtcacaagctgatgtctcttactgttgtggctcttgtggatatcctctgaacttgaca 218

                                                                       
Query: 61  tcctcaaatcgaatcacatctaacattgcatctgaatataagagatctgttaaaaaggga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 tcctcaaatcgaatcacatctaacattgcatctgaatataagagatctgttaaaaaggga 278

                                                     
Query: 121 tcaatctcttttgcttcagttgatctcagccgatttacacag 162
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tcaatctcttttgcttcagttgatctcagccgatttacacag 320



 Score =  196 bits (99), Expect = 7e-50
 Identities = 99/99 (100%)
 Strand = Plus / Plus

                                                                       
Query: 262 agagaatcacctgctctttgtggacttgagccttccgtttcatctagctctcagggaaaa 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 agagaatcacctgctctttgtggacttgagccttccgtttcatctagctctcagggaaaa 378

                                                  
Query: 322 ttcatcataaagattcgatctctacagccttcagaagag 360
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ttcatcataaagattcgatctctacagccttcagaagag 417