Miyakogusa Predicted Gene
- Lj3g3v2385420.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2385420.1 Non Chatacterized Hit- tr|B8AEB3|B8AEB3_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,44.71,0.000000000002,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; Kelch_1,Kelch repeat type 1; F-box,F-box domain,
cy,CUFF.43960.1
(1416 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS331388 similar to UniRef100_A7Q6X7 Cluster: Chromosom... 1239 0.0
gnl|LJGI|FS357537 weakly similar to UniRef100_A7Q6X7 Cluster: Ch... 1130 0.0
gnl|LJGI|DC593780 similar to UniRef100_A7Q6X7 Cluster: Chromosom... 400 e-111
gnl|LJGI|BP058913 94 3e-18
gnl|LJGI|TC61484 similar to UniRef100_A7NV34 Cluster: Chromosome... 68 2e-10
>gnl|LJGI|FS331388 similar to UniRef100_A7Q6X7 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 798
Score = 1239 bits (625), Expect = 0.0
Identities = 625/625 (100%)
Strand = Plus / Plus
Query: 1 atggggaatatactgagtcagaacagttccaagactagatctagtagttcttttgaggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 atggggaatatactgagtcagaacagttccaagactagatctagtagttcttttgaggtt 233
Query: 61 ttgcaaggggaagcttgcaagagacagaggttgttatcaagcattctcgacgacaacttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 ttgcaaggggaagcttgcaagagacagaggttgttatcaagcattctcgacgacaacttg 293
Query: 121 agaataattccggcacttcctaatgaggtatcaactcagattctagctagagttcctcga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 agaataattccggcacttcctaatgaggtatcaactcagattctagctagagttcctcga 353
Query: 181 atttattacttgaatctgaagttagtttgccgcacttggaaggaagctcttgagaattct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 atttattacttgaatctgaagttagtttgccgcacttggaaggaagctcttgagaattct 413
Query: 241 gaactatttcatgtgagaaaagagcttggaaccacagaggaatggctttacatactaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gaactatttcatgtgagaaaagagcttggaaccacagaggaatggctttacatactaaca 473
Query: 301 aaggtcaaggatgacaagcttttatggcatgccttagaccctctttccagaagatggcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 aaggtcaaggatgacaagcttttatggcatgccttagaccctctttccagaagatggcaa 533
Query: 361 aagttgccaccaatgccaaaagttggctttgaaaatgaatcaaagcagggtgtgtcttcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 aagttgccaccaatgccaaaagttggctttgaaaatgaatcaaagcagggtgtgtcttcc 593
Query: 421 tttcccctttggagcatggtgagttcaagcatcagaattgctgatattataatgagctgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tttcccctttggagcatggtgagttcaagcatcagaattgctgatattataatgagctgg 653
Query: 481 ctcggccggagggacgcgctggaccggatgccattttgcggttgctcaattggagctgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 ctcggccggagggacgcgctggaccggatgccattttgcggttgctcaattggagctgtt 713
Query: 541 gatggttgcatctatgcagtaggaggattttcaagagcttcagcaatgaaatctgtttgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 gatggttgcatctatgcagtaggaggattttcaagagcttcagcaatgaaatctgtttgg 773
Query: 601 cagtatgatccagtgaaaaacactt 625
|||||||||||||||||||||||||
Sbjct: 774 cagtatgatccagtgaaaaacactt 798
>gnl|LJGI|FS357537 weakly similar to UniRef100_A7Q6X7 Cluster: Chromosome chr12
scaffold_57, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_57, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (37%)
Length = 570
Score = 1130 bits (570), Expect = 0.0
Identities = 570/570 (100%)
Strand = Plus / Minus
Query: 842 tagctggtttgctcaagcctattgccactggaatgagttcatataggggaaggttatttg 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tagctggtttgctcaagcctattgccactggaatgagttcatataggggaaggttatttg 511
Query: 902 tccctcaaagcctgtattgctggccattttttgttgatgctggtggagaagtttatgatc 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tccctcaaagcctgtattgctggccattttttgttgatgctggtggagaagtttatgatc 451
Query: 962 caaatgtgaattcatggcttgaaatgccaattggcatgagtgaaggttggcctgcaaggc 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 caaatgtgaattcatggcttgaaatgccaattggcatgagtgaaggttggcctgcaaggc 391
Query: 1022 aagctggaacaaaattgtgtgttgctgtcaatgatgttctgtatgctcttgatccttcag 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 aagctggaacaaaattgtgtgttgctgtcaatgatgttctgtatgctcttgatccttcag 331
Query: 1082 attctcttgacagcactgcaaagatcaaggtgtatgattttgaaggtgatgcttggaaag 1141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 attctcttgacagcactgcaaagatcaaggtgtatgattttgaaggtgatgcttggaaag 271
Query: 1142 ttgctgcaggggatgttcctattcatgattcagctgatctagaatctccttatcttttgg 1201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ttgctgcaggggatgttcctattcatgattcagctgatctagaatctccttatcttttgg 211
Query: 1202 ctggtctacttggaaaacttcatgtgataactacagatggtgatcataacattgtagtgt 1261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ctggtctacttggaaaacttcatgtgataactacagatggtgatcataacattgtagtgt 151
Query: 1262 tgcagggtgacatgcaaaatggtttggctttctccaaattcagtgaagatggtgaatcat 1321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 tgcagggtgacatgcaaaatggtttggctttctccaaattcagtgaagatggtgaatcat 91
Query: 1322 cagcagaaactgagaaagaattttggagggttcttgcaactaggagtggtagatctgctg 1381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 cagcagaaactgagaaagaattttggagggttcttgcaactaggagtggtagatctgctg 31
Query: 1382 aactagttagctgtcaaacacttgaaattt 1411
||||||||||||||||||||||||||||||
Sbjct: 30 aactagttagctgtcaaacacttgaaattt 1
>gnl|LJGI|DC593780 similar to UniRef100_A7Q6X7 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 582
Score = 400 bits (202), Expect = e-111
Identities = 202/202 (100%)
Strand = Plus / Minus
Query: 1176 tgatctagaatctccttatcttttggctggtctacttggaaaacttcatgtgataactac 1235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 tgatctagaatctccttatcttttggctggtctacttggaaaacttcatgtgataactac 523
Query: 1236 agatggtgatcataacattgtagtgttgcagggtgacatgcaaaatggtttggctttctc 1295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 agatggtgatcataacattgtagtgttgcagggtgacatgcaaaatggtttggctttctc 463
Query: 1296 caaattcagtgaagatggtgaatcatcagcagaaactgagaaagaattttggagggttct 1355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 caaattcagtgaagatggtgaatcatcagcagaaactgagaaagaattttggagggttct 403
Query: 1356 tgcaactaggagtggtagatct 1377
||||||||||||||||||||||
Sbjct: 402 tgcaactaggagtggtagatct 381
>gnl|LJGI|BP058913
Length = 102
Score = 93.7 bits (47), Expect = 3e-18
Identities = 57/59 (96%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 775 acaggtatatggtcccaattacctagcatgccttttgcaaaagctcaggc-tctaccaa 832
||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 44 acaggtatatggtcccaattacctagcatgcctttggcaaaagctcaggcgtctaccaa 102
>gnl|LJGI|TC61484 similar to UniRef100_A7NV34 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 928
Score = 67.9 bits (34), Expect = 2e-10
Identities = 133/166 (80%)
Strand = Plus / Plus
Query: 880 tcatataggggaaggttatttgtccctcaaagcctgtattgctggccattttttgttgat 939
||||||| ||||||||| | ||| || || || |||||| ||||| ||||||||||||
Sbjct: 34 tcatatatgggaaggttgtgtgttccacagagtttgtattcatggcccttttttgttgat 93
Query: 940 gctggtggagaagtttatgatccaaatgtgaattcatggcttgaaatgccaattggcatg 999
| ||| || ||| | |||||||| | || |||||| | |||||||||| ||| |||
Sbjct: 94 gttgggggtgaaatctatgatcctgaaacaaactcatgggtagaaatgccaaatggaatg 153
Query: 1000 agtgaaggttggcctgcaaggcaagctggaacaaaattgtgtgttg 1045
| || |||||||||||||||||||| || ||||||||| ||||||
Sbjct: 154 ggagagggttggcctgcaaggcaagcaggtacaaaattgagtgttg 199