Miyakogusa Predicted Gene
- Lj3g3v2385410.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2385410.1 tr|B9P7R2|B9P7R2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_793382 PE=4
SV=1,39.67,0.000000001,Chaperone J-domain,Heat shock protein DnaJ,
N-terminal; DNAJ_2,Heat shock protein DnaJ, N-terminal; ,CUFF.43944.1
(499 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69979 weakly similar to UniRef100_A9SSC7 Cluster: Pre... 339 1e-92
gnl|LJGI|TC63200 weakly similar to UniRef100_A9SSC7 Cluster: Pre... 301 2e-81
>gnl|LJGI|TC69979 weakly similar to UniRef100_A9SSC7 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(24%)
Length = 670
Score = 339 bits (171), Expect = 1e-92
Identities = 201/211 (95%)
Strand = Plus / Plus
Query: 5 atgtgctatccttaagctcaagcctaagcatttccaagccacttcattcctttccacact 64
|||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 56 atgtgctatccttaagctcaagcctaagcattgccaagccgcttcattcctttccacact 115
Query: 65 ctagtaaacagcaaagaacttttctggtgaactttgcaatttcatgcagaggagctacaa 124
|||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||
Sbjct: 116 ctagtaaacagcaaagaactactcaggtgaactttgctatttcatgcagaggagctacaa 175
Query: 125 agctaaaggaagaaaccacccatggaaacctctataaagtgttgtccttgaaacccggaa 184
|||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 176 agctaaaggaagaaaccacccatggaaacctctacaaagttctgtccttgaaacccggaa 235
Query: 185 gtgcgatggatgagataaagagagcatacag 215
|||| ||||||||||||||||||||||||||
Sbjct: 236 gtgccatggatgagataaagagagcatacag 266
Score = 309 bits (156), Expect = 9e-84
Identities = 257/289 (88%), Gaps = 10/289 (3%)
Strand = Plus / Plus
Query: 215 gccatgatccttccatgaaagaggagtcaacgaagatgtttgttcaactaaatgaagctt 274
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 299 gccatgatccttccatgaaagaggagtcaactaagatgtttgttcagctaaatgaagctt 358
Query: 275 acaagacactgtcaaatcccctgcttagagaacaatatgacagtgaa------ttgggtt 328
||||| |||||||||||||||||||||||| | | |||||||||||| |||| ||
Sbjct: 359 acaaggcactgtcaaatcccctgcttagagcagagtatgacagtgaaattgaattggatt 418
Query: 329 tcagaagtgaaatgaatattaatgttagtgatgaggggttgagaagtatgtggcaggagc 388
|||||||||||| ||||||| |||| |||||||| ||||||| ||||||||||||||
Sbjct: 419 tcagaagtgaaaccaatatta---ttagggatgagggattgagaaatatgtggcaggagc 475
Query: 389 aagtggttcatgatatgaacatgaagacaaagtctcgcagacgcatgggacaaaaagggg 448
|||||| ||||| |||| ||||||||| ||||||||||||||||||||| |||||||
Sbjct: 476 ttgtggttgatgatttgaatttgaagacaaggtctcgcagacgcatgggacagaaagggg 535
Query: 449 gatcatggagcagcagaatgaagacacagaacatggaaaacaagaacta 497
||||| |||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 536 gatcagggagcagcagaatgaagaca-agaacatgaaaaacaagaacta 583
>gnl|LJGI|TC63200 weakly similar to UniRef100_A9SSC7 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(24%)
Length = 730
Score = 301 bits (152), Expect = 2e-81
Identities = 256/289 (88%), Gaps = 10/289 (3%)
Strand = Plus / Plus
Query: 215 gccatgatccttccatgaaagaggagtcaacgaagatgtttgttcaactaaatgaagctt 274
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 304 gccatgatccttccatgaaagaggagtcaacgaagatgtttgttcagctaaatgaagctt 363
Query: 275 acaagacactgtcaaatcccctgcttagagaacaatatgacag------tgaattgggtt 328
|||||||||||||||||||||||||||||| | | |||||||| |||||||| ||
Sbjct: 364 acaagacactgtcaaatcccctgcttagagcagagtatgacagtgaaattgaattggatt 423
Query: 329 tcagaagtgaaatgaatattaatgttagtgatgaggggttgagaagtatgtggcaggagc 388
|||||||||||| ||||| |||||| |||||||| ||||||| ||||||||||||||
Sbjct: 424 tcagaagtgaaaccaatat---tgttagggatgagggattgagaaatatgtggcaggagc 480
Query: 389 aagtggttcatgatatgaacatgaagacaaagtctcgcagacgcatgggacaaaaagggg 448
|||||| ||||| |||| ||||||||| ||||||||||||||||||||| |||||||
Sbjct: 481 ttgtggttgatgatttgaatttgaagacaaggtctcgcagacgcatgggacagaaagggg 540
Query: 449 gatcatggagcagcagaatgaagacacagaacatggaaaacaagaacta 497
|||| ||||||||||||||| |||| |||||||| |||||| ||||||
Sbjct: 541 tatcagggagcagcagaatgaggaca-agaacatgaaaaacaggaacta 588
Score = 299 bits (151), Expect = 9e-81
Identities = 184/195 (94%)
Strand = Plus / Plus
Query: 21 ctcaagcctaagcatttccaagccacttcattcctttccacactctagtaaacagcaaag 80
||||||| ||||||||||||||||| |||||| | ||||| |||||||||||||||||||
Sbjct: 77 ctcaagcataagcatttccaagccatttcattgccttccaaactctagtaaacagcaaag 136
Query: 81 aacttttctggtgaactttgcaatttcatgcagaggagctacaaagctaaaggaagaaac 140
| ||| || |||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 137 agcttctcaggtgaattttgcaatttcttgcagaggagctacaaagctaaaggaagaaac 196
Query: 141 cacccatggaaacctctataaagtgttgtccttgaaacccggaagtgcgatggatgagat 200
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 197 cacccatggaaacctctataaagtgttgtccttgaaacccggaagtgctatggatgagat 256
Query: 201 aaagagagcatacag 215
|||||||||||||||
Sbjct: 257 aaagagagcatacag 271