Miyakogusa Predicted Gene
- Lj3g3v2385390.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2385390.1 Non Chatacterized Hit- tr|A9NM38|A9NM38_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,35.78,0.00000000009,DnaJ,Heat shock protein DnaJ, N-terminal;
seg,NULL; Chaperone J-domain,Heat shock protein DnaJ,
N-te,CUFF.43942.1
(486 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63200 weakly similar to UniRef100_A9SSC7 Cluster: Pre... 280 8e-75
gnl|LJGI|TC69979 weakly similar to UniRef100_A9SSC7 Cluster: Pre... 256 1e-67
>gnl|LJGI|TC63200 weakly similar to UniRef100_A9SSC7 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(24%)
Length = 730
Score = 280 bits (141), Expect = 8e-75
Identities = 265/304 (87%), Gaps = 13/304 (4%)
Strand = Plus / Plus
Query: 191 accaccctgatgtgtgccatgatccttccatgaaagaggagtcaacaaggatgtttgttc 250
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 289 accaccctgatgtgtgccatgatccttccatgaaagaggagtcaacgaagatgtttgttc 348
Query: 251 agctaaatgcagcttacaagacactgtcaaatcccctgcttagagaacagtatgacagtg 310
||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 349 agctaaatgaagcttacaagacactgtcaaatcccctgcttagagcagagtatgacagtg 408
Query: 311 aaattaatttgggtttcagaagtgaaatgaaagtttgtgatgatgatgaggggttgagaa 370
||||| | |||| |||||||||||||| || |||| | | |||||||| |||||||
Sbjct: 409 aaattgaattggatttcagaagtgaaa-ccaatattgttagg--gatgagggattgagaa 465
Query: 371 gtaggtggcaagagcaagtggttg---------agttgaagacaaggtctcgcagacgca 421
|| |||||| |||| ||||||| | |||||||||||||||||||||||||
Sbjct: 466 atatgtggcaggagcttgtggttgatgatttgaatttgaagacaaggtctcgcagacgca 525
Query: 422 tgggacaacaaggggggtcatggagcagcagaatgaggacacagaacatgaaaaacagga 481
||||||| |||||| ||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 526 tgggacagaaaggggtatcagggagcagcagaatgaggaca-agaacatgaaaaacagga 584
Query: 482 acta 485
||||
Sbjct: 585 acta 588
Score = 258 bits (130), Expect = 3e-68
Identities = 175/190 (92%)
Strand = Plus / Plus
Query: 1 atggatgttctaactttaagctcaagctcaagcctaagcatttccaagacatttcattgc 60
||||||| |||| |||||||||||| ||||||| |||||||||||||| |||||||||||
Sbjct: 51 atggatgctctatctttaagctcaaactcaagcataagcatttccaagccatttcattgc 110
Query: 61 cttccacagtctagtaaacagcaaagaacttctcaggttcactttgctatttcttgcaga 120
|||||| | |||||||||||||||||| |||||||||| | ||||| ||||||||||||
Sbjct: 111 cttccaaactctagtaaacagcaaagagcttctcaggtgaattttgcaatttcttgcaga 170
Query: 121 ggagctacaaagctaaaggaagaaaccacctatggaaacctctacaaagttttgtccttg 180
|||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||
Sbjct: 171 ggagctacaaagctaaaggaagaaaccacccatggaaacctctataaagtgttgtccttg 230
Query: 181 aaacccggaa 190
||||||||||
Sbjct: 231 aaacccggaa 240
>gnl|LJGI|TC69979 weakly similar to UniRef100_A9SSC7 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(24%)
Length = 670
Score = 256 bits (129), Expect = 1e-67
Identities = 262/304 (86%), Gaps = 13/304 (4%)
Strand = Plus / Plus
Query: 191 accaccctgatgtgtgccatgatccttccatgaaagaggagtcaacaaggatgtttgttc 250
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 284 accaccctgatgtgtgccatgatccttccatgaaagaggagtcaactaagatgtttgttc 343
Query: 251 agctaaatgcagcttacaagacactgtcaaatcccctgcttagagaacagtatgacagtg 310
||||||||| |||||||||| |||||||||||||||||||||||| | ||||||||||||
Sbjct: 344 agctaaatgaagcttacaaggcactgtcaaatcccctgcttagagcagagtatgacagtg 403
Query: 311 aaattaatttgggtttcagaagtgaaatgaaagtttgtgatgatgatgaggggttgagaa 370
||||| | |||| |||||||||||||| || || | | | |||||||| |||||||
Sbjct: 404 aaattgaattggatttcagaagtgaaa-ccaatattattagg--gatgagggattgagaa 460
Query: 371 gtaggtggcaagagcaagtggttg---------agttgaagacaaggtctcgcagacgca 421
|| |||||| |||| ||||||| | |||||||||||||||||||||||||
Sbjct: 461 atatgtggcaggagcttgtggttgatgatttgaatttgaagacaaggtctcgcagacgca 520
Query: 422 tgggacaacaaggggggtcatggagcagcagaatgaggacacagaacatgaaaaacagga 481
||||||| ||||||| ||| ||||||||||||||| |||| ||||||||||||||| ||
Sbjct: 521 tgggacagaaagggggatcagggagcagcagaatgaagaca-agaacatgaaaaacaaga 579
Query: 482 acta 485
||||
Sbjct: 580 acta 583
Score = 228 bits (115), Expect = 3e-59
Identities = 154/167 (92%)
Strand = Plus / Plus
Query: 24 aagctcaagcctaagcatttccaagacatttcattgccttccacagtctagtaaacagca 83
||||||||||||||||||| ||||| | |||||| | ||||||| ||||||||||||||
Sbjct: 69 aagctcaagcctaagcattgccaagccgcttcattcctttccacactctagtaaacagca 128
Query: 84 aagaacttctcaggttcactttgctatttcttgcagaggagctacaaagctaaaggaaga 143
||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 129 aagaactactcaggtgaactttgctatttcatgcagaggagctacaaagctaaaggaaga 188
Query: 144 aaccacctatggaaacctctacaaagttttgtccttgaaacccggaa 190
||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 189 aaccacccatggaaacctctacaaagttctgtccttgaaacccggaa 235