Miyakogusa Predicted Gene
- Lj3g3v2341100.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2341100.1 Non Chatacterized Hit- tr|I1MKV5|I1MKV5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,85.56,0,DEAD-like
helicases superfamily,Helicase, superfamily 1/2, ATP-binding domain;
helicase superfamily ,CUFF.43953.1
(3564 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS324888 similar to UniRef100_A2Q217 Cluster: HMG-I and... 1231 0.0
gnl|LJGI|TC76337 similar to UniRef100_A2Q217 Cluster: HMG-I and ... 835 0.0
gnl|LJGI|BP043794 weakly similar to UniRef100_A2Q217 Cluster: HM... 283 4e-75
>gnl|LJGI|FS324888 similar to UniRef100_A2Q217 Cluster: HMG-I and HMG-Y, DNA-binding;
Bromodomain; Helicase, C-terminal; n=1; Medicago
truncatula|Rep: HMG-I and HMG-Y, DNA-binding;
Bromodomain; Helicase, C-terminal - Medicago truncatula
(Barrel medic), partial (14%)
Length = 646
Score = 1231 bits (621), Expect = 0.0
Identities = 638/646 (98%)
Strand = Plus / Plus
Query: 1280 gtcgaggcattgttgattcggaggatgaccttgcaactaaggatcgctatataggatcca 1339
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 gtcgaggcattgttgattcggaggatgaacttgcaactaaggatcgctatataggatcca 60
Query: 1340 ttgagagcctcataaggaacaatattcagcaatataagatagatatggctgatgaggtca 1399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgagagcctcataaggaacaatattcagcaatataagatagatatggctgatgaggtca 120
Query: 1400 taaatgctggacggttcgatcaaagaacaacacatgaagaaagacgtttgactttggaga 1459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taaatgctggacggttcgatcaaagaacaacacatgaagaaagacgtttgactttggaga 180
Query: 1460 cattattacatgacgaagagaggtgtcaagaaactgtccatgatgtcccctcattgcagg 1519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cattattacatgacgaagagaggtgtcaagaaactgtccatgatgtcccctcattgcagg 240
Query: 1520 aggtaaatcgcatgattgctaggagtgaagaagaagttgaactgtttgaccaaatggacg 1579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aggtaaatcgcatgattgctaggagtgaagaagaagttgaactgtttgaccaaatggacg 300
Query: 1580 atgaactagattggattgatgaaatgacacggtttgttcatatacctaaatggcttcgag 1639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atgaactagattggattgatgaaatgacacggtttgttcatatacctaaatggcttcgag 360
Query: 1640 ccaatacaagagaagtgaatgctgcgattgctgctttatcnnnnnnnccatcaaagaaca 1699
|||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 361 ccaatacaagagaagtgaatgctgcgattgctgctttatcaaaaaaaccatcaaagaaca 420
Query: 1700 ctttattgggtggtagtattggcatggaagcaggtgaacttggttctgaaagaagaagag 1759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctttattgggtggtagtattggcatggaagcaggtgaacttggttctgaaagaagaagag 480
Query: 1760 gaagacccaagggaaagcgtcctagttataaagagttggaagatgaagatttggaatact 1819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaagacccaagggaaagcgtcctagttataaagagttggaagatgaagatttggaatact 540
Query: 1820 ccgaagcaagctctgatgaaagaaatggatatgcacatgaggaaggggaaatgggagaat 1879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccgaagcaagctctgatgaaagaaatggatatgcacatgaggaaggggaaatgggagaat 600
Query: 1880 ttgaagatgataggtatatcggagctgatggagatcagcccattga 1925
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgaagatgataggtatatcggagctgatggagatcagcccattga 646
>gnl|LJGI|TC76337 similar to UniRef100_A2Q217 Cluster: HMG-I and HMG-Y, DNA-binding;
Bromodomain; Helicase, C-terminal; n=1; Medicago
truncatula|Rep: HMG-I and HMG-Y, DNA-binding;
Bromodomain; Helicase, C-terminal - Medicago truncatula
(Barrel medic), partial (6%)
Length = 687
Score = 835 bits (421), Expect = 0.0
Identities = 435/437 (99%), Gaps = 2/437 (0%)
Strand = Plus / Plus
Query: 3130 ccttcacagaggtcactgcaacgcggatcggcttctagtggtgaaagtaacaggataaaa 3189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccttcacagaggtcactgcaacgcggatcggcttctagtggtgaaagtaacaggataaaa 60
Query: 3190 ggcccacagaagcaatcaagaactagaagtggttgtgctggcagcagccgcgagcagctt 3249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcccacagaagcaatcaagaactagaagtggttgtgctggcagcagccgcgagcagctt 120
Query: 3250 caacaggatgattctccacttgctcatcccggtgaactggttgtatgcaagaagaaaaga 3309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caacaggatgattctccacttgctcatcccggtgaactggttgtatgcaagaagaaaaga 180
Query: 3310 aatgacagggagaaatcactggtgaagcctaggactggccctgtttcgccaacgagtggg 3369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatgacagggagaaatcactggtgaagcctaggactggccctgtttcgccaacgagtggg 240
Query: 3370 ggtccctctatgagaagttcagggtcaagttcagtccccaaggatgctagattaacacaa 3429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggtccctctatgagaagttcagggtcaagttcagtccccaaggatgctagattaacacaa 300
Query: 3430 caaactgctcatgcacaagggtgggctggccaggc-atctcaacctaatggttctggtgg 3488
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 301 caaactgctcatgcacaagggtgggctggccaggcaatctcaacctaatggttctggtgg 360
Query: 3489 cccagttgggtgggcaaa-ccctgtaaagcggctaagaacagattctgggaagaggagac 3547
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cccagttgggtgggcaaacccctgtaaagcggctaagaacagattctgggaagaggagac 420
Query: 3548 ccagccatacataaatt 3564
|||||||||||||||||
Sbjct: 421 ccagccatacataaatt 437
>gnl|LJGI|BP043794 weakly similar to UniRef100_A2Q217 Cluster: HMG-I and HMG-Y,
DNA-binding; Bromodomain; Helicase, C-terminal; n=1;
Medicago truncatula|Rep: HMG-I and HMG-Y, DNA-binding;
Bromodomain; Helicase, C-terminal - Medicago truncatula
(Barrel medic), partial (15%)
Length = 490
Score = 283 bits (143), Expect = 4e-75
Identities = 323/383 (84%)
Strand = Plus / Plus
Query: 2646 cactaagatgactgaaatcatccagagaaggtgcaaaaatgtaattagcaagatccaaag 2705
|||||| ||||||||||||||||| ||| ||||||| ||||||||||||||| |||| ||
Sbjct: 28 cactaaaatgactgaaatcatccaaagagggtgcaagaatgtaattagcaagctccagag 87
Query: 2706 gagaatagacaaagaaggccatcaaattgtacctctgttaacagatttatggaagaggat 2765
|||||||||||| || ||||| ||| |||||||| || | |||| ||| | |||||||||
Sbjct: 88 gagaatagacaaggatggccagcaagttgtacctttgctgacagcttttttgaagaggat 147
Query: 2766 tgagaattccgggtacgctggtggatctggaaacaacctgttggattttcgaaaaattga 2825
||||||||| |||||| ||| ||||||||| || | ||||||||||| ||||| |||||
Sbjct: 148 tgagaattctgggtacactgctggatctgggaaaactctgttggatttacgaaagattga 207
Query: 2826 tcagcggattgatagattggagtataatggagtaacagagcttgtacttgatgtccagtt 2885
||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||
Sbjct: 208 tcagcggattgatagattggagtataatggagtaatggagcttgtttctgatgtgcagtt 267
Query: 2886 catgttaaagagtgcgatgcatttttatggtttttcatatgaggtaagatctgaagcaag 2945
|||||| | |||||| ||||||| |||||| | ||| | ||||||| |||||||
Sbjct: 268 catgttgaggagtgcaatgcattcttatggctactcagaagaggtaaacaatgaagcaga 327
Query: 2946 gaaggttcatgatctcttttttgatatcttgaaaattgtgtttcctgacacggacttccg 3005
||||||| ||||||||||||||||||||||||||| ||||| || ||||||| |
Sbjct: 328 ccgggttcataatctcttttttgatatcttgaaaattgcatttcccaacgtggacttcag 387
Query: 3006 agaggcaagaagtgcactttctt 3028
||| ||||||| || ||||||||
Sbjct: 388 agaagcaagaaatggactttctt 410