Miyakogusa Predicted Gene
- Lj3g3v2340920.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2340920.1 NODE_40834_length_1679_cov_14.275164.path2.1
(1044 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP033484 similar to UniRef100_Q2HTK9 Cluster: SKP1 comp... 729 0.0
gnl|LJGI|FS318303 similar to UniRef100_Q2HTK9 Cluster: SKP1 comp... 656 0.0
gnl|LJGI|DC593786 similar to UniRef100_Q2HTK9 Cluster: SKP1 comp... 254 1e-66
gnl|LJGI|TC81984 similar to UniRef100_A7QG29 Cluster: Chromosome... 240 1e-62
>gnl|LJGI|BP033484 similar to UniRef100_Q2HTK9 Cluster: SKP1 component; n=1; Medicago
truncatula|Rep: SKP1 component - Medicago truncatula
(Barrel medic), partial (41%)
Length = 540
Score = 729 bits (368), Expect = 0.0
Identities = 368/368 (100%)
Strand = Plus / Plus
Query: 1 atgtcagaaattgatatgcctgttattaaacctgagatgatgaagccttatgtatggctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 atgtcagaaattgatatgcctgttattaaacctgagatgatgaagccttatgtatggctt 232
Query: 61 caaacgtccgatgattcaatccaacaagtggaacaagaaattgcaatgttttgcccactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 caaacgtccgatgattcaatccaacaagtggaacaagaaattgcaatgttttgcccactg 292
Query: 121 atatgccaagaaattatacaaaaaggcaccggatcttccaagaactgtgcaatatgtctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 atatgccaagaaattatacaaaaaggcaccggatcttccaagaactgtgcaatatgtctt 352
Query: 181 cctcaacaagtcagtcctgctatgttgagcttaattcttgattattgtcgattccatcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 cctcaacaagtcagtcctgctatgttgagcttaattcttgattattgtcgattccatcaa 412
Query: 241 gtaccaggccgctcaaacaaggaacgaaagtcttatgatgagaaattcgttaggatagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gtaccaggccgctcaaacaaggaacgaaagtcttatgatgagaaattcgttaggatagac 472
Query: 301 acagaaaggctctgtgagttaacgtctgctgcagacagccttcagttaaagccactggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 acagaaaggctctgtgagttaacgtctgctgcagacagccttcagttaaagccactggtt 532
Query: 361 gatcttac 368
||||||||
Sbjct: 533 gatcttac 540
>gnl|LJGI|FS318303 similar to UniRef100_Q2HTK9 Cluster: SKP1 component; n=1; Medicago
truncatula|Rep: SKP1 component - Medicago truncatula
(Barrel medic), partial (37%)
Length = 666
Score = 656 bits (331), Expect = 0.0
Identities = 331/331 (100%)
Strand = Plus / Plus
Query: 1 atgtcagaaattgatatgcctgttattaaacctgagatgatgaagccttatgtatggctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 atgtcagaaattgatatgcctgttattaaacctgagatgatgaagccttatgtatggctt 395
Query: 61 caaacgtccgatgattcaatccaacaagtggaacaagaaattgcaatgttttgcccactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 caaacgtccgatgattcaatccaacaagtggaacaagaaattgcaatgttttgcccactg 455
Query: 121 atatgccaagaaattatacaaaaaggcaccggatcttccaagaactgtgcaatatgtctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 atatgccaagaaattatacaaaaaggcaccggatcttccaagaactgtgcaatatgtctt 515
Query: 181 cctcaacaagtcagtcctgctatgttgagcttaattcttgattattgtcgattccatcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 cctcaacaagtcagtcctgctatgttgagcttaattcttgattattgtcgattccatcaa 575
Query: 241 gtaccaggccgctcaaacaaggaacgaaagtcttatgatgagaaattcgttaggatagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gtaccaggccgctcaaacaaggaacgaaagtcttatgatgagaaattcgttaggatagac 635
Query: 301 acagaaaggctctgtgagttaacgtctgctg 331
|||||||||||||||||||||||||||||||
Sbjct: 636 acagaaaggctctgtgagttaacgtctgctg 666
>gnl|LJGI|DC593786 similar to UniRef100_Q2HTK9 Cluster: SKP1 component; n=1; Medicago
truncatula|Rep: SKP1 component - Medicago truncatula
(Barrel medic), partial (41%)
Length = 598
Score = 254 bits (128), Expect = 1e-66
Identities = 290/344 (84%)
Strand = Plus / Plus
Query: 25 attaaacctgagatgatgaagccttatgtatggcttcaaacgtccgatgattcaatccaa 84
|||||||| |||||| ||||||| ||||| |||||||| || || |||| ||||||||||
Sbjct: 253 attaaacccgagatgttgaagccctatgtttggcttcagacttcagatggttcaatccaa 312
Query: 85 caagtggaacaagaaattgcaatgttttgcccactgatatgccaagaaattatacaaaaa 144
||||||||||| ||| |||||| ||||||| ||||| || |||||||| ||||| |||
Sbjct: 313 caagtggaacatgaagttgcaacagtttgccctctgatttgtcaagaaataatacacaaa 372
Query: 145 ggcaccggatcttccaagaactgtgcaatatgtcttcctcaacaagtcagtcctgctatg 204
||||| |||||||||||||| |||||||||| |||||||||| ||||||||||||| |||
Sbjct: 373 ggcactggatcttccaagaattgtgcaatatctcttcctcaagaagtcagtcctgcgatg 432
Query: 205 ttgagcttaattcttgattattgtcgattccatcaagtaccaggccgctcaaacaaggaa 264
|||||||||||||||||||||| || || |||||| || || |||||||||||||||
Sbjct: 433 ctgagcttaattcttgattattgccgttttcatcaacgacagggtcgctcaaacaaggaa 492
Query: 265 cgaaagtcttatgatgagaaattcgttaggatagacacagaaaggctctgtgagttaacg 324
||||| ||||||||||||||| ||| || ||||||| | ||||| || ||||
Sbjct: 493 aagaagtcctatgatgagaaattcattaagaaagacacaaaccagctctttgggttagtt 552
Query: 325 tctgctgcagacagccttcagttaaagccactggttgatcttac 368
|||||||||||||||||||| ||| || |||||||||||||
Sbjct: 553 aaagctgcagacagccttcagttgaagtcattggttgatcttac 596
>gnl|LJGI|TC81984 similar to UniRef100_A7QG29 Cluster: Chromosome undetermined
scaffold_91, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_91, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(8%)
Length = 423
Score = 240 bits (121), Expect = 1e-62
Identities = 138/141 (97%), Gaps = 2/141 (1%)
Strand = Plus / Plus
Query: 906 cagggaagtggaagattttgcccgcagattaaattctgactggccagagagaatgcaaga 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20 cagggaagtggaagattttgcccgcagattaaattctgactggccagagagaatgcaaga 79
Query: 966 attcttaacgtcagggcaagaaaggaatacaatgcttttcagtactcat-gggactg-gt 1023
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 80 attcttaacgtcagggcaagaaaggaatacaatgcttttcagtactcatcgggactgcgt 139
Query: 1024 tttctaagacgacatgcttga 1044
||||||| |||||||||||||
Sbjct: 140 tttctaaaacgacatgcttga 160