Miyakogusa Predicted Gene

Lj3g3v2330880.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2330880.2 Non Chatacterized Hit- tr|B9FAB8|B9FAB8_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,27.78,3e-18,coiled-coil,NULL; seg,NULL; OS03G0143700
PROTEIN,NULL; PHOSPHATIDYLINOSITOL
N-ACETYLGLUCOSAMINYLTRAN,CUFF.43925.2
         (1167 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP055549 similar to UniRef100_A7PZG8 Cluster: Chromosom...   212   4e-54

>gnl|LJGI|BP055549 similar to UniRef100_A7PZG8 Cluster: Chromosome chr15 scaffold_40,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr15 scaffold_40, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (23%)
          Length = 485

 Score =  212 bits (107), Expect = 4e-54
 Identities = 107/107 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1061 cagacttgttcggaaatataaccaaggaagaggaggaagaaacccagcggattttacaga 1120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427  cagacttgttcggaaatataaccaaggaagaggaggaagaaacccagcggattttacaga 368

                                                           
Query: 1121 aagcaagaaggcgtaagaggaagtataataatgttataaccatctaa 1167
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367  aagcaagaaggcgtaagaggaagtataataatgttataaccatctaa 321