Miyakogusa Predicted Gene

Lj3g3v2330880.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2330880.1 Non Chatacterized Hit- tr|Q10T00|Q10T00_ORYSJ
PAIR1 protein, putative, expressed OS=Oryza sativa
sub,35.48,1e-17,OS03G0143700 PROTEIN,NULL; PHOSPHATIDYLINOSITOL
N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P (DOWN SYND,CUFF.43925.1
         (1209 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP055549 similar to UniRef100_A7PZG8 Cluster: Chromosom...   327   9e-89

>gnl|LJGI|BP055549 similar to UniRef100_A7PZG8 Cluster: Chromosome chr15 scaffold_40,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr15 scaffold_40, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (23%)
          Length = 485

 Score =  327 bits (165), Expect = 9e-89
 Identities = 165/165 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1045 cttgaggactttcagtgccggcttcttaactctgtccagtccacttcattctcttcttca 1104
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485  cttgaggactttcagtgccggcttcttaactctgtccagtccacttcattctcttcttca 426

                                                                        
Query: 1105 gacttgttcggaaatataaccaaggaagaggaggaagaaacccagcggattttacagaaa 1164
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425  gacttgttcggaaatataaccaaggaagaggaggaagaaacccagcggattttacagaaa 366

                                                         
Query: 1165 gcaagaaggcgtaagaggaagtataataatgttataaccatctaa 1209
            |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365  gcaagaaggcgtaagaggaagtataataatgttataaccatctaa 321