Miyakogusa Predicted Gene
- Lj3g3v2330830.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2330830.2 tr|G7L4N2|G7L4N2_MEDTR Rop guanine nucleotide
exchange factor OS=Medicago truncatula
GN=MTR_7g077690,76,0.00000000000001,PRONE,Plant specific Rop
nucleotide exchanger, PRONE; coiled-coil,NULL; seg,NULL; SUBFAMILY NOT
NAME,CUFF.43920.2
(858 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82188 similar to UniRef100_A4IJ27 Cluster: At4g00460;... 585 e-166
gnl|LJGI|GO032282 226 2e-58
gnl|LJGI|TC59766 homologue to UniRef100_A7P8P0 Cluster: Chromoso... 54 1e-06
>gnl|LJGI|TC82188 similar to UniRef100_A4IJ27 Cluster: At4g00460; n=1; Arabidopsis
thaliana|Rep: At4g00460 - Arabidopsis thaliana
(Mouse-ear cress), partial (42%)
Length = 757
Score = 585 bits (295), Expect = e-166
Identities = 295/295 (100%)
Strand = Plus / Plus
Query: 564 tggtctttctgaaaagtcaaggaggcatttaaggaagaagagagactgtgctaatcaaat 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggtctttctgaaaagtcaaggaggcatttaaggaagaagagagactgtgctaatcaaat 60
Query: 624 tcataaagcagccatggcaataaatagcagtgttcttgcagaaatggaaatcccagaaac 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcataaagcagccatggcaataaatagcagtgttcttgcagaaatggaaatcccagaaac 120
Query: 684 atacacagcaaatcttcccaagagtggaagagcaagtctgggggacacgatttaccgcta 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atacacagcaaatcttcccaagagtggaagagcaagtctgggggacacgatttaccgcta 180
Query: 744 tatgcattctgcagacaagttctcacctgattaccttcttgactgtctgaaaataagcac 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatgcattctgcagacaagttctcacctgattaccttcttgactgtctgaaaataagcac 240
Query: 804 tgaacacgaagcacttcagcttgcagataaagttgaatcttcaatgtacacatgg 858
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgaacacgaagcacttcagcttgcagataaagttgaatcttcaatgtacacatgg 295
>gnl|LJGI|GO032282
Length = 311
Score = 226 bits (114), Expect = 2e-58
Identities = 114/114 (100%)
Strand = Plus / Plus
Query: 1 atgaagcagagaaagcattctttagatgataaatctgatgaccttaatctcttggagtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 atgaagcagagaaagcattctttagatgataaatctgatgaccttaatctcttggagtca 257
Query: 61 gagcttgaaatgatgaaggaaagatttgcaaagattctacttggggaagacatg 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gagcttgaaatgatgaaggaaagatttgcaaagattctacttggggaagacatg 311
>gnl|LJGI|TC59766 homologue to UniRef100_A7P8P0 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 1134
Score = 54.0 bits (27), Expect = 1e-06
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 70 atgatgaaggaaagatttgcaaagattctacttggggaagacatgtctggtggtggaaaa 129
||||||||||| || || || ||| | || || |||||||||||||||||||| ||||||
Sbjct: 398 atgatgaaggagaggttcgctaagctgcttctaggggaagacatgtctggtgggggaaaa 457
Query: 130 ggtgtcagcac 140
|| ||| ||||
Sbjct: 458 ggggtctgcac 468