Miyakogusa Predicted Gene
- Lj3g3v2320530.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2320530.1 Non Chatacterized Hit- tr|I1KUZ9|I1KUZ9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.3148
PE=,89.82,0,seg,NULL; Med6,Mediator complex, subunit Med6;
MED-6-RELATED,Mediator complex, subunit Med6,CUFF.43930.1
(732 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59984 similar to UniRef100_A7P6Y6 Cluster: Chromosome... 1451 0.0
gnl|LJGI|DC599992 homologue to UniRef100_A7P6Y6 Cluster: Chromos... 184 5e-46
gnl|LJGI|AV776464 similar to UniRef100_A7P6Y6 Cluster: Chromosom... 168 3e-41
>gnl|LJGI|TC59984 similar to UniRef100_A7P6Y6 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (91%)
Length = 1182
Score = 1451 bits (732), Expect = 0.0
Identities = 732/732 (100%)
Strand = Plus / Plus
Query: 1 atggcgacgccggcggcaatgttggagggagtagcgccgccgcaacctccggggacggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 atggcgacgccggcggcaatgttggagggagtagcgccgccgcaacctccggggacggac 176
Query: 61 atgaccggaatatgcttccgggaccaactgtggctcaacacgtaccctctggatcgcaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 atgaccggaatatgcttccgggaccaactgtggctcaacacgtaccctctggatcgcaac 236
Query: 121 ctcgtgttcgattacttcgccctctccccgttctacgattggacctgcaacaacgagcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 ctcgtgttcgattacttcgccctctccccgttctacgattggacctgcaacaacgagcaa 296
Query: 181 ctccgaatgcgctctctccaccctctcgatctctctcaactcacgaaaatgacaggcact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ctccgaatgcgctctctccaccctctcgatctctctcaactcacgaaaatgacaggcact 356
Query: 241 gaatttgtgctcagtgaagtcatggaaccccacctttttcttattcgcaagcaaaagagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gaatttgtgctcagtgaagtcatggaaccccacctttttcttattcgcaagcaaaagagg 416
Query: 301 gatagccctgacaaagttacgccaatgcttgcttattacatcttggatggttcaatttac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gatagccctgacaaagttacgccaatgcttgcttattacatcttggatggttcaatttac 476
Query: 361 caggctccacaactatgcaatgtttttgccgctcgaattggaagggcactctattatata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 caggctccacaactatgcaatgtttttgccgctcgaattggaagggcactctattatata 536
Query: 421 gaaaaagcttttactacagctgcctcaaagttggagaagataggatatgctggaccagtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 gaaaaagcttttactacagctgcctcaaagttggagaagataggatatgctggaccagtt 596
Query: 481 gactctgaaactgagactgcatcgctggaatcaaaggttgctaaggagacaattgaccta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 gactctgaaactgagactgcatcgctggaatcaaaggttgctaaggagacaattgaccta 656
Query: 541 aaggaagttaagcgagtggatcatattcttgcatccttgcaacgcaagctaccaccagct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 aaggaagttaagcgagtggatcatattcttgcatccttgcaacgcaagctaccaccagct 716
Query: 601 ccacctccaccacctttcccagaagggtatgtgccaccttcaacagctgaaactgagaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 ccacctccaccacctttcccagaagggtatgtgccaccttcaacagctgaaactgagaaa 776
Query: 661 ggcactgaaactcaggaatcagcagagccacaagctcctcaagttgatcctataattgat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 ggcactgaaactcaggaatcagcagagccacaagctcctcaagttgatcctataattgat 836
Query: 721 caaggacctgca 732
||||||||||||
Sbjct: 837 caaggacctgca 848
>gnl|LJGI|DC599992 homologue to UniRef100_A7P6Y6 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 575
Score = 184 bits (93), Expect = 5e-46
Identities = 121/130 (93%), Gaps = 4/130 (3%)
Strand = Plus / Plus
Query: 87 actgtggctcaacacgtaccctctggatcgcaacctcgtgttcgattacttcgccctctc 146
||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 450 actgtggctcaacacgtaccccttggatcgcaacctcgtcttcgattacttcgccctctc 509
Query: 147 cccgttctacgattggacctgcaacaacgagcaactccgaatgcgctctctccaccctct 206
||| || |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 510 cccttt----gattggacctgcaacaacgagcaactccgaatacgctctctccaccctct 565
Query: 207 cgatctctct 216
||||||||||
Sbjct: 566 cgatctctct 575
Score = 87.7 bits (44), Expect = 9e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 2 tggcgacgccggcggcaatgttggagggagtagcgccgccgcaacctccggggacggaca 61
|||||||||||||||||||| |||| |||| | ||||||||||||||||||||| |||||
Sbjct: 388 tggcgacgccggcggcaatgatggaaggaggaacgccgccgcaacctccggggatggaca 447
Query: 62 tgac 65
||||
Sbjct: 448 tgac 451
>gnl|LJGI|AV776464 similar to UniRef100_A7P6Y6 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 395
Score = 168 bits (85), Expect = 3e-41
Identities = 169/186 (90%), Gaps = 12/186 (6%)
Strand = Plus / Minus
Query: 557 tggatcatattcttgcatccttgcaacgca-agctaccaccagctccacctccaccacc- 614
||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 395 tggatcatattcttgcatccttgca-cgcacagctaccaccagctccacctccaccaccc 337
Query: 615 --tttcccagaagggtatgtg-ccacctt--caacagctga-aactgagaaaggca-ctg 667
|| |||||||||||||| | |||||| || | ||||| |||||||||||||| |||
Sbjct: 336 tcttccccagaagggtatggggccacctctccacccgctgacaactgagaaaggcaactg 277
Query: 668 aaact-caggaatc-agcagagccacaagctcctcaagttgatcctataattgatcaagg 725
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaactgcaggaatccagcagagccacaagctcctcaagttgatcctataattgatcaagg 217
Query: 726 acctgc 731
||||||
Sbjct: 216 acctgc 211