Miyakogusa Predicted Gene
- Lj3g3v2318240.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2318240.2 Non Chatacterized Hit- tr|I1KV14|I1KV14_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,75.95,0,PAP_central,Poly(A) polymerase, central domain;
PAP_RNA-bind,Poly(A) polymerase, RNA-binding domain;,CUFF.43876.2
(2103 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS330741 similar to UniRef100_A7P724 Cluster: Chromosom... 151 2e-35
gnl|LJGI|DC593295 similar to UniRef100_Q2V3C3 Cluster: Uncharact... 151 2e-35
gnl|LJGI|TC79600 125 1e-27
gnl|LJGI|TC77597 107 3e-22
>gnl|LJGI|FS330741 similar to UniRef100_A7P724 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 726
Score = 151 bits (76), Expect = 2e-35
Identities = 103/112 (91%)
Strand = Plus / Plus
Query: 230 gaggatacactgatcaaatggttgaagatgcaaatgctgtcattttcacttttggttctt 289
|||| ||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 436 gaggctacaccgatcagatggttgatgatgcaaatgctgtcattttcacttttggctctt 495
Query: 290 atcgccttggtgttcatgggcctggagctgacatagacactttgtgcattgg 341
|||||||||| |||||||| || |||| ||||||||||||||||||||||||
Sbjct: 496 atcgccttggggttcatggaccaggagttgacatagacactttgtgcattgg 547
>gnl|LJGI|DC593295 similar to UniRef100_Q2V3C3 Cluster: Uncharacterized protein
At4g32850.8; n=1; Arabidopsis thaliana|Rep:
Uncharacterized, partial (11%)
Length = 573
Score = 151 bits (76), Expect = 2e-35
Identities = 103/112 (91%)
Strand = Plus / Plus
Query: 230 gaggatacactgatcaaatggttgaagatgcaaatgctgtcattttcacttttggttctt 289
|||| ||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 351 gaggctacaccgatcagatggttgatgatgcaaatgctgtcattttcacttttggctctt 410
Query: 290 atcgccttggtgttcatgggcctggagctgacatagacactttgtgcattgg 341
|||||||||| |||||||| || |||| ||||||||||||||||||||||||
Sbjct: 411 atcgccttggggttcatggaccaggagttgacatagacactttgtgcattgg 462
>gnl|LJGI|TC79600
Length = 493
Score = 125 bits (63), Expect = 1e-27
Identities = 66/67 (98%)
Strand = Plus / Plus
Query: 1 atggtgaattctgaaggattgggtgggtcggcgaaacaatatggtgttacaaagccaata 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 427 atggtgaattctgaaggattgggtgggtcggcgaaacaatatggtgttacaaagcccata 486
Query: 61 tcaatgg 67
|||||||
Sbjct: 487 tcaatgg 493
>gnl|LJGI|TC77597
Length = 758
Score = 107 bits (54), Expect = 3e-22
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 2010 gccaaatgcagtgctagggacgattcttgattctaacggaggagttcactcagaagtggt 2069
||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 360 gccaaatgcagtgttagggacaattcttgattctaatggaggagttcactcagaagtggt 419
Query: 2070 gcaaaacccgatgataag 2087
||||| | |||||||||
Sbjct: 420 acaaaagctgatgataag 437