Miyakogusa Predicted Gene

Lj3g3v2318180.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2318180.1 CUFF.43859.1
         (193 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81328                                                      149   7e-36

>gnl|LJGI|TC81328 
          Length = 815

 Score =  149 bits (75), Expect = 7e-36
 Identities = 82/83 (98%), Gaps = 1/83 (1%)
 Strand = Plus / Minus

                                                                       
Query: 112 tgggttttttgggagttgaggaagaagataacagttgttgggg-tgaggatgaagatttg 170
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 197 tgggttttttgggagttgaggaagaagataacagttgttggggttgaggatgaagatttg 138

                                  
Query: 171 tgaattgttagtgaaaccctaga 193
           |||||||||||||||||||||||
Sbjct: 137 tgaattgttagtgaaaccctaga 115



 Score = 73.8 bits (37), Expect = 3e-13
 Identities = 53/57 (92%), Gaps = 1/57 (1%)
 Strand = Plus / Minus

                                                                    
Query: 115 gttttttgggagttgaggaagaagataacagttgttg-gggtgaggatgaagatttg 170
           ||||||| ||||||||||||||||||||||||||||| || |||||||| |||||||
Sbjct: 409 gtttttttggagttgaggaagaagataacagttgttgaggttgaggatggagatttg 353



 Score = 71.9 bits (36), Expect = 1e-12
 Identities = 42/44 (95%)
 Strand = Plus / Minus

                                                       
Query: 112 tgggttttttgggagttgaggaagaagataacagttgttggggt 155
           |||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 300 tgggtttttttggagttgaggaagaagataaccgttgttggggt 257