Miyakogusa Predicted Gene
- Lj3g3v2318160.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2318160.1 Non Chatacterized Hit- tr|C0PLH8|C0PLH8_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,29.4,4e-18,seg,NULL,CUFF.43857.1
(1407 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS330144 homologue to UniRef100_A7P730 Cluster: Chromos... 1237 0.0
gnl|LJGI|TC59311 homologue to UniRef100_A7P730 Cluster: Chromoso... 1061 0.0
gnl|LJGI|TC71919 similar to UniRef100_A7P730 Cluster: Chromosome... 706 0.0
>gnl|LJGI|FS330144 homologue to UniRef100_A7P730 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 681
Score = 1237 bits (624), Expect = 0.0
Identities = 638/645 (98%)
Strand = Plus / Plus
Query: 1 atgaagaagaagggtttggccaatgtatccaacacgatgatgaattctcagaagcaccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 atgaagaagaagggtttggccaatgtatccaacacgatgatgaattctcagaagcaccct 96
Query: 61 caccttgaagatgatgatgacaccttcgatcgtcttcactccgatctttcttctcttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 caccttgaagatgatgatgacaccttcgatcgtcttcactccgatctttcttctcttttt 156
Query: 121 cttcagattgatgagattgttgtgaaagcgtttggattgaagaaagttagtcaaaagggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 cttcagattgatgagattgttgtgaaagcgtttggattgaagaaagttagtcaaaagggt 216
Query: 181 agcnnnnnnntcgaacctttctcccatgtgttgtctgacttgctctcatgcttaaagccc 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 agcaaaaaaatcgaacctttctcccatgtgttgtctgacttgctctcatgcttaaagccc 276
Query: 241 tgggtgcccagattgcaaattgcactctcatcactctcagtggagtctgagagtaaaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tgggtgcccagattgcaaattgcactctcatcactctcagtggagtctgagagtaaaaat 336
Query: 301 gaacaagtttctttttgtgaggaaagcaatgtcagtgagtgtggcagtcctcaagagacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gaacaagtttctttttgtgaggaaagcaatgtcagtgagtgtggcagtcctcaagagacc 396
Query: 361 accttggactctttggtgtctccttctccacttgtgtcatggcggggcgactgcactgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 accttggactctttggtgtctccttctccacttgtgtcatggcggggcgactgcactgtt 456
Query: 421 gatagaggtagacagatgtttatgctcacacctcttccattgtcaagagcattgttgtca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gatagaggtagacagatgtttatgctcacacctcttccattgtcaagagcattgttgtca 516
Query: 481 accaaacccaagcaaccacaaactaagtcagagtccgatgaattggcttcctctacttat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 accaaacccaagcaaccacaaactaagtcagagtccgatgaattggcttcctctacttat 576
Query: 541 ggtattgggacatcaacctttttagacttgtctagagacatgaacactttgctggactct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ggtattgggacatcaacctttttagacttgtctagagacatgaacactttgctggactct 636
Query: 601 gttctgatgaagcaagctccaactgagcctgccccttcttctgtt 645
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 gttctgatgaagcaagctccaactgagcctgccccttcttctgtt 681
>gnl|LJGI|TC59311 homologue to UniRef100_A7P730 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 845
Score = 1061 bits (535), Expect = 0.0
Identities = 549/556 (98%)
Strand = Plus / Plus
Query: 124 cagattgatgagattgttgtgaaagcgtttggattgaagaaagttagtcaaaagggtagc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 cagattgatgagattgttgtgaaagcgtttggattgaagaaagttagtcaaaagggtagc 349
Query: 184 nnnnnnntcgaacctttctcccatgtgttgtctgacttgctctcatgcttaaagccctgg 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 aaaaaaatcgaacctttctcccatgtgttgtctgacttgctctcatgcttaaagccctgg 409
Query: 244 gtgcccagattgcaaattgcactctcatcactctcagtggagtctgagagtaaaaatgaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gtgcccagattgcaaattgcactctcatcactctcagtggagtctgagagtaaaaatgaa 469
Query: 304 caagtttctttttgtgaggaaagcaatgtcagtgagtgtggcagtcctcaagagaccacc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 caagtttctttttgtgaggaaagcaatgtcagtgagtgtggcagtcctcaagagaccacc 529
Query: 364 ttggactctttggtgtctccttctccacttgtgtcatggcggggcgactgcactgttgat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ttggactctttggtgtctccttctccacttgtgtcatggcggggcgactgcactgttgat 589
Query: 424 agaggtagacagatgtttatgctcacacctcttccattgtcaagagcattgttgtcaacc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 agaggtagacagatgtttatgctcacacctcttccattgtcaagagcattgttgtcaacc 649
Query: 484 aaacccaagcaaccacaaactaagtcagagtccgatgaattggcttcctctacttatggt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 aaacccaagcaaccacaaactaagtcagagtccgatgaattggcttcctctacttatggt 709
Query: 544 attgggacatcaacctttttagacttgtctagagacatgaacactttgctggactctgtt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 attgggacatcaacctttttagacttgtctagagacatgaacactttgctggactctgtt 769
Query: 604 ctgatgaagcaagctccaactgagcctgccccttcttctgttgccattgaagaggcaaac 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 ctgatgaagcaagctccaactgagcctgccccttcttctgttgccattgaagaggcaaac 829
Query: 664 aatgaagagcccgggt 679
||||||||||||||||
Sbjct: 830 aatgaagagcccgggt 845
Score = 200 bits (101), Expect = 2e-50
Identities = 104/105 (99%)
Strand = Plus / Plus
Query: 22 aatgtatccaacacgatgatgaattctcagaagcaccctcaccttgaagatgatgatgac 81
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 2 aatgtatccaacacgatgatgaactctcagaagcaccctcaccttgaagatgatgatgac 61
Query: 82 accttcgatcgtcttcactccgatctttcttctctttttcttcag 126
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 accttcgatcgtcttcactccgatctttcttctctttttcttcag 106
>gnl|LJGI|TC71919 similar to UniRef100_A7P730 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (7%)
Length = 643
Score = 706 bits (356), Expect = 0.0
Identities = 368/372 (98%)
Strand = Plus / Plus
Query: 1036 gatgaaacatcattggagttggagaaggctgataatgaaccttgtatacagataactgat 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatgaaacatcattggagttggagaaggctgataatgaaccttgtatacagataactgat 60
Query: 1096 tccgttcttaagcaaccggtcagcaaattgaaagatgatatttccaaagatcgtaatcaa 1155
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 61 tccgttcttaagcaaccggtcagcgaattgaaagatgatatttccgaagatcgtaatcaa 120
Query: 1156 gccaaaatatcttgtgatcaagatcattctattgtcaactctttgcatatagagagcact 1215
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcccaaatatcttgtgatcaagatcattctattgtcaactctttgcatatagagagcact 180
Query: 1216 cccatgtggccggagcctgaaagctcatttcgaacagggaaacgtcccggtgaaaatact 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cccatgtggccggagcctgaaagctcatttcgaacagggaaacgtcccggtgaaaatact 240
Query: 1276 ttgaagaaggaattatggaccaagtttgaagcagcaaccgctggtgggtttcaatccaag 1335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgaagaaggaattatggaccaagtttgaagcagcaaccgctggtgggtttcaatccaag 300
Query: 1336 ttatctacagttcaagagaatacacggaaaggatttcttgacctgctggaagaagcttca 1395
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttatctacagttccagagaatacacggaaaggatttcttgacctgctggaagaagcttca 360
Query: 1396 aatgaacaatga 1407
||||||||||||
Sbjct: 361 aatgaacaatga 372