Miyakogusa Predicted Gene

Lj3g3v2315540.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2315540.1 CUFF.43811.1
         (1455 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65844                                                      789   0.0  

>gnl|LJGI|TC65844 
          Length = 932

 Score =  789 bits (398), Expect = 0.0
 Identities = 401/402 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1054 ctcaaacgtgtggcatttcgtaccatgtggctgactgcagatgattatcctttactgtta 1113
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321  ctcaaacgtgtggcatttcgtaccatgtggctgactgcagatgattatcctttactgtta 380

                                                                        
Query: 1114 ggatcagcagatctaggtgtttgtctgcatacttcatcatcaggattggaccttcccatg 1173
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381  ggatcagcagatctaggtgtttgtctgcatacttcatcatcaggattggaccttcccatg 440

                                                                        
Query: 1174 aagattgttgatatgtttggttgtggactgcctgtttgtgctgtttcatactcttgcatt 1233
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441  aagattgttgatatgtttggttgtggactgcctgtttgtgctgtttcatactcttgcatt 500

                                                                        
Query: 1234 aaagaactggtcagagttgacaaaaatggtcttctcttctcttcatcttcagagctagcg 1293
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501  aaagaactggtcagagttgacaaaaatggtcttctcttctcttcatcttcagagctagcg 560

                                                                        
Query: 1294 gatgaacttcttatgctcttcaagggatttcctgatggatgtgactctttgaaagttctc 1353
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561  gatgaacttcttatgctcttcaagggatttcctgatggatgtgactctttgaaagttctc 620

                                                                        
Query: 1354 aaatatggtgcattagaaactggttcttcagcaaggtgggctactgaatgggaagaacat 1413
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 621  aaatatggtgcattagaaactggttcttcagcaaggtgggctactgaattggaagaacat 680

                                                      
Query: 1414 gcgaagccactgataactgaggttatatcaagattttgattt 1455
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681  gcgaagccactgataactgaggttatatcaagattttgattt 722



 Score =  555 bits (280), Expect = e-157
 Identities = 280/280 (100%)
 Strand = Plus / Plus

                                                                        
Query: 735  gggtgaccatctccaaaatgagactttgtttacaactgaggttggttcaaacatgtattt 794
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2    gggtgaccatctccaaaatgagactttgtttacaactgaggttggttcaaacatgtattt 61

                                                                        
Query: 795  gaagccaaaccggcccgcacttgtagtaagcagtacgagctggactcctgatgaagattt 854
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62   gaagccaaaccggcccgcacttgtagtaagcagtacgagctggactcctgatgaagattt 121

                                                                        
Query: 855  tggcattcttttggaagctgctttgatgtatgacagacgtgttgctgctatattaaatga 914
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122  tggcattcttttggaagctgctttgatgtatgacagacgtgttgctgctatattaaatga 181

                                                                        
Query: 915  agatgattcactggatgaggaggtcatctggaaagaaatagcagatggaaaacaatcttt 974
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182  agatgattcactggatgaggaggtcatctggaaagaaatagcagatggaaaacaatcttt 241

                                                    
Query: 975  ataccccagattgttattcatcattactggtaaaggtcct 1014
            ||||||||||||||||||||||||||||||||||||||||
Sbjct: 242  ataccccagattgttattcatcattactggtaaaggtcct 281