Miyakogusa Predicted Gene
- Lj3g3v2315250.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2315250.1 Non Chatacterized Hit- tr|D7KIP1|D7KIP1_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,71.79,0.00000003, ,CUFF.43781.1
(1008 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS360438 similar to UniRef100_A7P767 Cluster: Chromosom... 912 0.0
gnl|LJGI|TC61337 similar to UniRef100_A7P767 Cluster: Chromosome... 420 e-117
gnl|LJGI|BP039121 homologue to UniRef100_Q9D7D1 Cluster: Adult m... 280 2e-74
>gnl|LJGI|FS360438 similar to UniRef100_A7P767 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (28%)
Length = 744
Score = 912 bits (460), Expect = 0.0
Identities = 460/460 (100%)
Strand = Plus / Minus
Query: 549 tcaagcaatgcatgatgccgtgtataagaagtacataatgttcaagaaatttcagggagc 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tcaagcaatgcatgatgccgtgtataagaagtacataatgttcaagaaatttcagggagc 685
Query: 609 aatgcagatggttgctatggcagaaactatgatatatatgaacatggatgactcctcaca 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aatgcagatggttgctatggcagaaactatgatatatatgaacatggatgactcctcaca 625
Query: 669 gaattactggcttcgcttattgatcagagaatgggtacaattctgcatatttgggtatat 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gaattactggcttcgcttattgatcagagaatgggtacaattctgcatatttgggtatat 565
Query: 729 tggatggattttcagatcacaagatttggcaccacacttctctgttatgccaaccacaaa 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tggatggattttcagatcacaagatttggcaccacacttctctgttatgccaaccacaaa 505
Query: 789 gtgtaaaggcgagactctggtgcctcccatctacagccttgaaatggacgcatcaacgtt 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtgtaaaggcgagactctggtgcctcccatctacagccttgaaatggacgcatcaacgtt 445
Query: 849 taaagaatttagcagtcatgaatggcacattggggtgccaacttgtacttttcatgatga 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 taaagaatttagcagtcatgaatggcacattggggtgccaacttgtacttttcatgatga 385
Query: 909 aagttccaaaaaagatgttcttgttatcattcagcatcctcgagcacaaaggctaagaaa 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aagttccaaaaaagatgttcttgttatcattcagcatcctcgagcacaaaggctaagaaa 325
Query: 969 gctcgatgccttctctcaaagcgctaactgtttgtagtgt 1008
||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gctcgatgccttctctcaaagcgctaactgtttgtagtgt 285
>gnl|LJGI|TC61337 similar to UniRef100_A7P767 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 784
Score = 420 bits (212), Expect = e-117
Identities = 212/212 (100%)
Strand = Plus / Plus
Query: 1 atggtgaactccggcgacggagtagacgagtcgtaccgagcacttccgtcgctctacttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 atggtgaactccggcgacggagtagacgagtcgtaccgagcacttccgtcgctctacttg 105
Query: 61 accttcttgtcgatctggttcctctccgcttgctcctggaccgcctacacctacaaaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 accttcttgtcgatctggttcctctccgcttgctcctggaccgcctacacctacaaaacc 165
Query: 121 cgccattttcagtggaataatttgcagtgggcacttacggtggttccgttgattaaagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 cgccattttcagtggaataatttgcagtgggcacttacggtggttccgttgattaaagca 225
Query: 181 ttgcagctcatgctatccttcctcttctggta 212
||||||||||||||||||||||||||||||||
Sbjct: 226 ttgcagctcatgctatccttcctcttctggta 257
>gnl|LJGI|BP039121 homologue to UniRef100_Q9D7D1 Cluster: Adult male tongue cDNA RIKEN
full-length enriched library clone:2310014L17 product:,
partial (3%)
Length = 481
Score = 280 bits (141), Expect = 2e-74
Identities = 171/181 (94%)
Strand = Plus / Minus
Query: 828 tgaaatggacgcatcaacgtttaaagaatttagcagtcatgaatggcacattggggtgcc 887
||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 481 tgaaatggacgcatccacgtttaaagaatttagccgtcatgaatggcaccttggggtgcc 422
Query: 888 aacttgtacttttcatgatgaaagttccaaaaaagatgttcttgttatcattcagcatcc 947
||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||
Sbjct: 421 cacttgtacttttcatgatggaagttcccaaaaagatgttcttggtatcattcagcatcc 362
Query: 948 tcgagcacaaaggctaagaaagctcgatgccttctctcaaagcgctaactgtttgtagtg 1007
|||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 361 tcgagccccaaggctaagaaagctcgatgccttctttcaaagcgctaactgtttgtagtg 302
Query: 1008 t 1008
|
Sbjct: 301 t 301