Miyakogusa Predicted Gene
- Lj3g3v2315220.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2315220.1 Non Chatacterized Hit- tr|I1KGL0|I1KGL0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,84.05,0,seg,NULL;
Domain present in VPS-27, Hrs and STAM,VHS subgroup; no
description,Armadillo-like helical,CUFF.43780.1
(2103 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69000 weakly similar to UniRef100_A7P771 Cluster: Chr... 1358 0.0
gnl|LJGI|TC64141 similar to UniRef100_Q9C5H4 Cluster: VHS domain... 950 0.0
gnl|LJGI|TC80728 homologue to UniRef100_A7P771 Cluster: Chromoso... 710 0.0
gnl|LJGI|AV413495 weakly similar to UniRef100_Q9C5H4 Cluster: VH... 664 0.0
>gnl|LJGI|TC69000 weakly similar to UniRef100_A7P771 Cluster: Chromosome chr9
scaffold_7, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_7, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (18%)
Length = 963
Score = 1358 bits (685), Expect = 0.0
Identities = 685/685 (100%)
Strand = Plus / Plus
Query: 1419 gaaaaaaggacatgcagatgatctcttttcggggatgacagttggtggtgataaacaggg 1478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gaaaaaaggacatgcagatgatctcttttcggggatgacagttggtggtgataaacaggg 61
Query: 1479 tgataatgcgaatcacgtgttggggaataaaagcgatcctgaactttttgacatttttgc 1538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tgataatgcgaatcacgtgttggggaataaaagcgatcctgaactttttgacatttttgc 121
Query: 1539 ttccaattccgagcaaggaaacaaagagttcgttggagacttaatggctggtttgtcaat 1598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ttccaattccgagcaaggaaacaaagagttcgttggagacttaatggctggtttgtcaat 181
Query: 1599 tgatgaaaatacctcaagtacgaagcagaagggaacatctcccaccttggaatctgaatc 1658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tgatgaaaatacctcaagtacgaagcagaagggaacatctcccaccttggaatctgaatc 241
Query: 1659 tttatttacaggtttaaataatcatatccctgacaatacttcaggtggcatgttgggctc 1718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tttatttacaggtttaaataatcatatccctgacaatacttcaggtggcatgttgggctc 301
Query: 1719 tcagccacttggatttaatgtaaatcccatgtttcctgccggtagtcttccttataatat 1778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tcagccacttggatttaatgtaaatcccatgtttcctgccggtagtcttccttataatat 361
Query: 1779 acaacctggtgttatgttgaaccatccgtatacctctcagcctcttaattatggtgctat 1838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 acaacctggtgttatgttgaaccatccgtatacctctcagcctcttaattatggtgctat 421
Query: 1839 gggaactctcttggctcagcaacaattcctggcaacaatggctaatttccaacaccttag 1898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gggaactctcttggctcagcaacaattcctggcaacaatggctaatttccaacaccttag 481
Query: 1899 taatgtgaacatgcgagatgatggtgttgctcaaattgctggacccaatggaagaacacc 1958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 taatgtgaacatgcgagatgatggtgttgctcaaattgctggacccaatggaagaacacc 541
Query: 1959 gataccagacatatttcaaccaggtttttcacctcaaactcccagctcaatgatcaacag 2018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gataccagacatatttcaaccaggtttttcacctcaaactcccagctcaatgatcaacag 601
Query: 2019 ttcaaagaaagaagacactaaagcatttgattttatctcggaccatcttgcctcttctcg 2078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ttcaaagaaagaagacactaaagcatttgattttatctcggaccatcttgcctcttctcg 661
Query: 2079 tgattcaaggagagtgatttgaaat 2103
|||||||||||||||||||||||||
Sbjct: 662 tgattcaaggagagtgatttgaaat 686
>gnl|LJGI|TC64141 similar to UniRef100_Q9C5H4 Cluster: VHS domain-containing protein
At3g16270; n=1; Arabidopsis thaliana|Rep: VHS
domain-containing protein At3g16270 - Arabidopsis
thaliana (Mouse-ear cress), partial (6%)
Length = 683
Score = 950 bits (479), Expect = 0.0
Identities = 492/495 (99%), Gaps = 1/495 (0%)
Strand = Plus / Plus
Query: 1609 acctcaagtacgaagcagaagggaacatctcccaccttggaatctgaatctttatttaca 1668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 acctcaagtacgaagcagaagggaacatctcccaccttggaatctgaatctttatttaca 61
Query: 1669 ggtttaaataatcatatccctgacaatacttcaggtggcatgttgggctctcagccactt 1728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ggtttaaataatcatatccctgacaatacttcaggtggcatgttgggctctcagccactt 121
Query: 1729 ggatttaatgtaaatcccatgtttcctgccggtagtcttccttataatatacaacctggt 1788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ggatttaatgtaaatcccatgtttcctgccggtagtcttccttataatatacaacctggt 181
Query: 1789 gttatgttgaaccatccgtatacctctcagcctcttaattatggtgctatgggaactctc 1848
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 182 gttatgttgaaccatccgtatacctctcagcctcttaattacggtgctatgggaactctc 241
Query: 1849 ttggctcagcaacaattcctggcaacaatggctaatttccaacaccttagtaatgtgaac 1908
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ctggctcagcaacaattcctggcaacaatggctaatttccaacaccttagtaatgtgaac 301
Query: 1909 atgcgagatgatggtgttgctcaaattgctggacccaatggaagaacaccgataccagac 1968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 atgcgagatgatggtgttgctcaaattgctggacccaatggaagaacaccgataccagac 361
Query: 1969 atatttcaaccaggtttttcacctcaaactcccagctcaatgatcaacagttcaaagaaa 2028
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 362 atatttcaaccaggtttttcacctcaaact-ccagctcaatgatcaacagttcaaagaaa 420
Query: 2029 gaagacactaaagcatttgattttatctcggaccatcttgcctcttctcgtgattcaagg 2088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaagacactaaagcatttgattttatctcggaccatcttgcctcttctcgtgattcaagg 480
Query: 2089 agagtgatttgaaat 2103
|||||||||||||||
Sbjct: 481 agagtgatttgaaat 495
>gnl|LJGI|TC80728 homologue to UniRef100_A7P771 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 376
Score = 710 bits (358), Expect = 0.0
Identities = 367/370 (99%)
Strand = Plus / Plus
Query: 1 atggagacgagtcgaagagcggtggaatcgtattggaggtcgcggttgattgattcagct 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 7 atggagacgagtcgaagagcggtggaatcgtattggaggtcgcgaatgattgattcagct 66
Query: 61 actgcggatgaagataaagtcacgccggtgtacaagttggaagaaatttgtgagcttttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 actgcggatgaagataaagtcacgccggtgtacaagttggaagaaatttgtgagcttttg 126
Query: 121 cgctcttcgcatgctagtattgtgaaggaggtgtcagagtttgtcttgaaacgtttggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 cgctcttcgcatgctagtattgtgaaggaggtgtcagagtttgtcttgaaacgtttggag 186
Query: 181 cataagagcccaattgttaaacagaaggcattaagattgataaaatatgtggttggaaag 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 187 cataagagcccaattgttaaacagaaggcattaagagtgataaaatatgtggttggaaag 246
Query: 241 tctggtgtggaattcagaagggaaatgcagagacattcggtggcagttcgtcaattattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tctggtgtggaattcagaagggaaatgcagagacattcggtggcagttcgtcaattattt 306
Query: 301 cactacaaaggacaattggatcctttaaaaggggatgcactaaataaggctgtgcgagac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 cactacaaaggacaattggatcctttaaaaggggatgcactaaataaggctgtgcgagac 366
Query: 361 actgctcagg 370
||||||||||
Sbjct: 367 actgctcagg 376
>gnl|LJGI|AV413495 weakly similar to UniRef100_Q9C5H4 Cluster: VHS domain-containing
protein At3g16270; n=1; Arabidopsis thaliana|Rep: VHS
domain-containing protein At3g16270 - Arabidopsis
thaliana (Mouse-ear cress), partial (7%)
Length = 338
Score = 664 bits (335), Expect = 0.0
Identities = 335/335 (100%)
Strand = Plus / Plus
Query: 1275 aaacaacccaaatataacaaattcgacatcatccacacccctagttgatgatttatttgg 1334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 aaacaacccaaatataacaaattcgacatcatccacacccctagttgatgatttatttgg 63
Query: 1335 agattttagtggctccaatggagctagtcatgaactgaaaaatgatgatgacccgtttgc 1394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 agattttagtggctccaatggagctagtcatgaactgaaaaatgatgatgacccgtttgc 123
Query: 1395 tgatgtatcatttcatgcaagtgagaaaaaaggacatgcagatgatctcttttcggggat 1454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tgatgtatcatttcatgcaagtgagaaaaaaggacatgcagatgatctcttttcggggat 183
Query: 1455 gacagttggtggtgataaacagggtgataatgcgaatcacgtgttggggaataaaagcga 1514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gacagttggtggtgataaacagggtgataatgcgaatcacgtgttggggaataaaagcga 243
Query: 1515 tcctgaactttttgacatttttgcttccaattccgagcaaggaaacaaagagttcgttgg 1574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tcctgaactttttgacatttttgcttccaattccgagcaaggaaacaaagagttcgttgg 303
Query: 1575 agacttaatggctggtttgtcaattgatgaaaata 1609
|||||||||||||||||||||||||||||||||||
Sbjct: 304 agacttaatggctggtttgtcaattgatgaaaata 338