Miyakogusa Predicted Gene
- Lj3g3v2310040.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2310040.1 Non Chatacterized Hit- tr|I3T8D3|I3T8D3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.59,0,Ribosomal_S12,Ribosomal protein S12/S23; S23_S12_E_A:
ribosomal protein S23 (S12),Ribosomal protein ,CUFF.43770.1
(432 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60420 UniRef100_P46297 Cluster: 40S ribosomal protein... 856 0.0
gnl|LJGI|TC63359 homologue to UniRef100_P46297 Cluster: 40S ribo... 387 e-107
gnl|LJGI|TC60429 homologue to UniRef100_P46297 Cluster: 40S ribo... 311 2e-84
>gnl|LJGI|TC60420 UniRef100_P46297 Cluster: 40S ribosomal protein S23; n=1; Fragaria
x ananassa|Rep: 40S ribosomal protein S23 - Fragaria
ananassa (Strawberry), complete
Length = 749
Score = 856 bits (432), Expect = 0.0
Identities = 432/432 (100%)
Strand = Plus / Plus
Query: 1 atggggaaaacccggggtatgggagcggctcgcaagttgaagtcccaccgaagaaggcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 atggggaaaacccggggtatgggagcggctcgcaagttgaagtcccaccgaagaaggcag 141
Query: 61 aggtgggctgacaagtcatacaagaaatcacatcttggaaatgaatggaagaagccattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 aggtgggctgacaagtcatacaagaaatcacatcttggaaatgaatggaagaagccattc 201
Query: 121 gctgggtcgtctcacgccaaaggcattgttcttgaaaaaattggcattgaggctaagcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gctgggtcgtctcacgccaaaggcattgttcttgaaaaaattggcattgaggctaagcag 261
Query: 181 ccaaactctgctattaggaagtgtgctcgagtacagttaatcaaaaatggaaagaagatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ccaaactctgctattaggaagtgtgctcgagtacagttaatcaaaaatggaaagaagatt 321
Query: 241 gcagcctttgtgccaaatgatggttgcttgaactacattgaagaaaatgatgaagtgctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gcagcctttgtgccaaatgatggttgcttgaactacattgaagaaaatgatgaagtgctg 381
Query: 301 attgctggttttggccgaaaaggtcacgccgtcggagatattcctggagtccgatttaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 attgctggttttggccgaaaaggtcacgccgtcggagatattcctggagtccgatttaag 441
Query: 361 gttgtgaaagtatctggggtgtcacttcttgcactcttcaaagagaagaaggaaaagcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gttgtgaaagtatctggggtgtcacttcttgcactcttcaaagagaagaaggaaaagcct 501
Query: 421 aggtcttgattc 432
||||||||||||
Sbjct: 502 aggtcttgattc 513
>gnl|LJGI|TC63359 homologue to UniRef100_P46297 Cluster: 40S ribosomal protein S23;
n=1; Fragaria x ananassa|Rep: 40S ribosomal protein S23
- Fragaria ananassa (Strawberry), complete
Length = 746
Score = 387 bits (195), Expect = e-107
Identities = 369/427 (86%)
Strand = Plus / Plus
Query: 1 atggggaaaacccggggtatgggagcggctcgcaagttgaagtcccaccgaagaaggcag 60
|||||||| || || || |||||||| ||||||||| ||| ||||||||| ||||||||
Sbjct: 85 atggggaagacacgtggaatgggagctgctcgcaagctgatgtcccaccgcagaaggcaa 144
Query: 61 aggtgggctgacaagtcatacaagaaatcacatcttggaaatgaatggaagaagccattc 120
|||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||
Sbjct: 145 aggtgggctgacaagtcatacaagaagtcccatcttggaaatgaatggaagaagcctttt 204
Query: 121 gctgggtcgtctcacgccaaaggcattgttcttgaaaaaattggcattgaggctaagcag 180
||||| || ||||| ||||| || ||||| |||||||| ||||| |||||||||||||||
Sbjct: 205 gctggctcatctcatgccaagggaattgtccttgaaaagattggtattgaggctaagcag 264
Query: 181 ccaaactctgctattaggaagtgtgctcgagtacagttaatcaaaaatggaaagaagatt 240
|| |||||||||||| | |||||||| | || ||| | ||||| ||||| |||||||||
Sbjct: 265 cccaactctgctattcgtaagtgtgccagggttcagctcatcaagaatgggaagaagatt 324
Query: 241 gcagcctttgtgccaaatgatggttgcttgaactacattgaagaaaatgatgaagtgctg 300
||||| ||||| || |||||||||||||||||||| |||||||| || |||||||| ||
Sbjct: 325 gcagcatttgtccccaatgatggttgcttgaactatattgaagagaacgatgaagtcttg 384
Query: 301 attgctggttttggccgaaaaggtcacgccgtcggagatattcctggagtccgatttaag 360
|||||||| ||||| ||||||||||| || || || ||||||||||| ||| | || |||
Sbjct: 385 attgctggatttggacgaaaaggtcatgctgttggtgatattcctggtgtcaggttcaag 444
Query: 361 gttgtgaaagtatctggggtgtcacttcttgcactcttcaaagagaagaaggaaaagcct 420
|||||||| || ||||| ||||| |||||||| || ||||| |||||||||||||||||
Sbjct: 445 gttgtgaaggtctctggtgtgtctcttcttgcccttttcaaggagaagaaggaaaagcca 504
Query: 421 aggtctt 427
|||||||
Sbjct: 505 aggtctt 511
>gnl|LJGI|TC60429 homologue to UniRef100_P46297 Cluster: 40S ribosomal protein S23;
n=1; Fragaria x ananassa|Rep: 40S ribosomal protein S23
- Fragaria ananassa (Strawberry), complete
Length = 786
Score = 311 bits (157), Expect = 2e-84
Identities = 346/409 (84%)
Strand = Plus / Plus
Query: 19 atgggagcggctcgcaagttgaagtcccaccgaagaaggcagaggtgggctgacaagtca 78
|||||||| || |||||| ||| ||| ||||| || |||| ||||||| |||||||||
Sbjct: 156 atgggagctgcccgcaagctgatgtctcaccgtaggcggcaacggtgggcagacaagtca 215
Query: 79 tacaagaaatcacatcttggaaatgaatggaagaagccattcgctgggtcgtctcacgcc 138
||||| ||||| |||||||||||||||||||||||||| || ||||| || || || |||
Sbjct: 216 tacaaaaaatctcatcttggaaatgaatggaagaagccttttgctggttcatcccatgcc 275
Query: 139 aaaggcattgttcttgaaaaaattggcattgaggctaagcagccaaactctgctattagg 198
|| ||||||||||||||||| || || ||||||||||||||||| |||||||| ||| |
Sbjct: 276 aagggcattgttcttgaaaagataggtattgaggctaagcagcctaactctgccattcga 335
Query: 199 aagtgtgctcgagtacagttaatcaaaaatggaaagaagattgcagcctttgtgccaaat 258
|| |||||| |||| || | ||||||||||| ||||||||||| || ||||| ||||||
Sbjct: 336 aaatgtgctagagttcaactcatcaaaaatgggaagaagattgctgcatttgttccaaat 395
Query: 259 gatggttgcttgaactacattgaagaaaatgatgaagtgctgattgctggttttggccga 318
||||||||||| || ||||||||||| ||||||||||| |||||||||| ||||| ||
Sbjct: 396 gatggttgcttaaattacattgaagagaatgatgaagtattgattgctggatttggacgt 455
Query: 319 aaaggtcacgccgtcggagatattcctggagtccgatttaaggttgtgaaagtatctggg 378
|||||||| |||||||| ||||||||||| ||| | || ||||||||||| || |||||
Sbjct: 456 aaaggtcatgccgtcggtgatattcctggtgtcaggttcaaggttgtgaaggtttctggt 515
Query: 379 gtgtcacttcttgcactcttcaaagagaagaaggaaaagcctaggtctt 427
|| || || || || || ||||| || |||||||| |||||||||||||
Sbjct: 516 gtctccctcctagctcttttcaaggaaaagaaggagaagcctaggtctt 564