Miyakogusa Predicted Gene
- Lj3g3v2309770.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2309770.1 tr|G7JRG7|G7JRG7_MEDTR IBR domain containing
protein OS=Medicago truncatula GN=MTR_4g060940 PE=4
SV=,68.37,0,IBR,Zinc finger, C6HC-type; RVT_3,NULL; no
description,Zinc finger, RING/FYVE/PHD-type; RING/U-box,N,CUFF.43759.1
(1659 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO034805 weakly similar to UniRef100_A7NZE4 Cluster: Ch... 1019 0.0
gnl|LJGI|FS360532 similar to UniRef100_A7NZE4 Cluster: Chromosom... 987 0.0
gnl|LJGI|GO041127 similar to UniRef100_A7NZE4 Cluster: Chromosom... 763 0.0
gnl|LJGI|BP036259 similar to UniRef100_A7NZE4 Cluster: Chromosom... 430 e-119
>gnl|LJGI|GO034805 weakly similar to UniRef100_A7NZE4 Cluster: Chromosome chr6
scaffold_3, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 675
Score = 1019 bits (514), Expect = 0.0
Identities = 539/546 (98%), Gaps = 1/546 (0%)
Strand = Plus / Plus
Query: 313 gaagacctcgtccgtcggattcacgaccagaagatggcgtcggagattctcgcgatccct 372
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 131 gaagacctcgtccgtcggattcacgaccagaagatggcctcggagattctcgcgatccct 190
Query: 373 gagagagattgggaggagtggggtgacaattacgagaaggcgttcggcgagggttgctcc 432
||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 191 gagagagat-gggaggagtggggtgacaattacgagaaggcgttcggcgggggttgctcc 249
Query: 433 tccggggaccctggtgcggtgtttagggtttatttcaagggtttggtgagtgaagatttt 492
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 250 tccggggaccctggtgcggtgtttagggtttatttcaagggtttggtgagtgaggatttt 309
Query: 493 gtgaatggtgagagtgagagagtggttttgggtgggattggtattgcgatttgtgatgag 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gtgaatggtgagagtgagagagtggttttgggtgggattggtattgcgatttgtgatgag 369
Query: 553 gctgataatgtgttgctggaagtttctaagccccttcttggtactgaaaccagtaagaaa 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gctgataatgtgttgctggaagtttctaagccccttcttggtactgaaaccagtaagaaa 429
Query: 613 attgcagaggctaaggctctgattgaagccttcaatgctgccattttcttggacctgaag 672
||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 430 atttcagaggctaaggctctgattgaagctttcaatgctgccattttcatggacctgaag 489
Query: 673 cgtgttgtttactattgtgattacccccctctcttgcaacatttaagtggaaagtggcct 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 cgtgttgtttactattgtgattacccccctctcttgcaacatttaagtggaaagtggcct 549
Query: 733 gtgaatcagcagaagcttgctagactagttaatgaagtgtatcttcttcaaagaaaattt 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gtgaatcagcagaagcttgctagactagttaatgaagtgtatcttcttcaaagaaaattt 609
Query: 793 acatactgcaatccaaggcttgtggcgagacatgatctcaagtatgcatttaagctggca 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 acatactgcaatccaaggcttgtggcgagacatgatctcaagtatgcatttaagctggca 669
Query: 853 agagat 858
||||||
Sbjct: 670 agagat 675
Score = 226 bits (114), Expect = 3e-58
Identities = 126/130 (96%)
Strand = Plus / Plus
Query: 7 atggacgacatggacgaaacccaagacttgcagtggttactatcggagcaccgccgtgaa 66
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 11 atggacgacatggacgaaacccaagacttgcagcggttactatcggagcaccgccgtgaa 70
Query: 67 ctcgccgccgcggaagccatggaaaccgatctcgacttcgcataccgtatccagttacaa 126
||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 71 ctcaccgccgcggaagccatggaaaccgatctcgactttgcataccgtatccagttacaa 130
Query: 127 gaagccctcg 136
|||| |||||
Sbjct: 131 gaagacctcg 140
>gnl|LJGI|FS360532 similar to UniRef100_A7NZE4 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (26%)
Length = 691
Score = 987 bits (498), Expect = 0.0
Identities = 501/502 (99%)
Strand = Plus / Minus
Query: 1062 tgaggggtgtaataatgaacttctagctgacagttgccggaaattcttgcctcataaact 1121
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 691 tgaggggtgtaataatgaacttctagctgacagttgccggaatttcttgcctcataaact 632
Query: 1122 aattgagaccatgcagcaacgaaaattggaagcttcaattcccgttaccgataaaattta 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 aattgagaccatgcagcaacgaaaattggaagcttcaattcccgttaccgataaaattta 572
Query: 1182 ttgtccttatcctagatgctctgcattaatgtcaaaaactgaggttttagagtactccaa 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ttgtccttatcctagatgctctgcattaatgtcaaaaactgaggttttagagtactccaa 512
Query: 1242 aaatcttactggttctgaaccaggacgcaagagatgtataaaatgtcgccgttttttctg 1301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 aaatcttactggttctgaaccaggacgcaagagatgtataaaatgtcgccgttttttctg 452
Query: 1302 tttcatgtgcaaggtcccttggcattttgatatgtcatgttataggtacaaaatgttgaa 1361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tttcatgtgcaaggtcccttggcattttgatatgtcatgttataggtacaaaatgttgaa 392
Query: 1362 tcctaaccctccagctgaagacctgaagctgaagtctctggcaacaagtagtttttggcg 1421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tcctaaccctccagctgaagacctgaagctgaagtctctggcaacaagtagtttttggcg 332
Query: 1422 gcagtgtgtgaaatgtaaccatatgattgaacttgctgaaggttgctatcacataacttg 1481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gcagtgtgtgaaatgtaaccatatgattgaacttgctgaaggttgctatcacataacttg 272
Query: 1482 cagatgcggtaatgaattttgctatcagtgtggagctgagtggaaggacaaaaaagcaac 1541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 cagatgcggtaatgaattttgctatcagtgtggagctgagtggaaggacaaaaaagcaac 212
Query: 1542 atgtgattgtccactttgggcc 1563
||||||||||||||||||||||
Sbjct: 211 atgtgattgtccactttgggcc 190
Score = 65.9 bits (33), Expect = 8e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 1627 tcatacactgatagtcctgatgatttttattaa 1659
|||||||||||||||||||||||||||||||||
Sbjct: 126 tcatacactgatagtcctgatgatttttattaa 94
>gnl|LJGI|GO041127 similar to UniRef100_A7NZE4 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (35%)
Length = 830
Score = 763 bits (385), Expect = 0.0
Identities = 565/627 (90%), Gaps = 10/627 (1%)
Strand = Plus / Minus
Query: 937 ttggaggatactgatatcaatcaannnnnnnctgttgatggatgtcaacaccggtattgc 996
|||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 830 ttggaggatactgatatcaatcaatttttt-ctgttgatggatgtcaacaccggtattgc 772
Query: 997 ttttcttgtgtgaaacaacatgtggaagtgaagctactccatggaatggtaccaaaatgc 1056
|||||||||||||||||||||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 771 ttttcttgtgtgaaacaacatgtggaggtgaagctgctccagggaatggtgccaaaatgc 712
Query: 1057 cctcatgaggggtgtaataatgaacttctagctgacagttgccggaaattcttgcctcat 1116
|||||||||||||| || ||||| ||||||||||| || |||||||||||||||||||||
Sbjct: 711 cctcatgaggggtgcaaaaatgagcttctagctgaaagctgccggaaattcttgcctcat 652
Query: 1117 aaactaattgagaccatgcagcaacgaaaattggaagcttcaattcccgttaccgataaa 1176
||||| |||||||||||||||||||||||| | |||||||||||||||||||| || |||
Sbjct: 651 aaactgattgagaccatgcagcaacgaaaagtagaagcttcaattcccgttactgagaaa 592
Query: 1177 atttattgtccttatcctagatgctctgcattaatgtcaaaaactgaggttttagagtac 1236
|| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 atctactgtccttatccaagatgctctgcattaatgtcaaaaactgaggttttagagtac 532
Query: 1237 tccaaaaatcttactggttctgaaccaggacgcaagagatgtataaaatgtcgccgtttt 1296
||||||||| ||| |||| || || ||| ||||||||||||||| |||||
Sbjct: 531 tccaaaaatgttattggtgctcaa---------aagcaatgtataaaatgtcgtggtttt 481
Query: 1297 ttctgtttcatgtgcaaggtcccttggcattttgatatgtcatgttataggtacaaaatg 1356
||||||||||| |||||||||||||||||| || |||| ||||| || || |||| |
Sbjct: 480 ttctgtttcatctgcaaggtcccttggcataatggtatgacatgtcatgcttataaaaag 421
Query: 1357 ttgaatcctaaccctccagctgaagacctgaagctgaagtctctggcaacaagtagtttt 1416
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 420 ttgaatcctaaccctcctgctgaagacctgaagctgaagtctctggcaacaaggagtctt 361
Query: 1417 tggcggcagtgtgtgaaatgtaaccatatgattgaacttgctgaaggttgctatcacata 1476
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tggcggcagtgtgtgaagtgtaaccatatgattgaacttgctgaaggttgctatcacatg 301
Query: 1477 acttgcagatgcggtaatgaattttgctatcagtgtggagctgagtggaaggacaaaaaa 1536
||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 300 acttgcagatgcggttatgaattttgctatcagtgcggagctgggtggaaggacaaaaaa 241
Query: 1537 gcaacatgtgattgtccactttgggcc 1563
||||||||| ||||||||||||||||
Sbjct: 240 gcaacatgttcttgtccactttgggcc 214
>gnl|LJGI|BP036259 similar to UniRef100_A7NZE4 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (19%)
Length = 517
Score = 430 bits (217), Expect = e-119
Identities = 324/361 (89%), Gaps = 9/361 (2%)
Strand = Plus / Minus
Query: 1203 tgcattaatgtcaaaaactgaggttttagagtactccaaaaatcttactggttctgaacc 1262
||||||||||||||||||||||||||||||||||||||||||| ||| |||| || ||
Sbjct: 517 tgcattaatgtcaaaaactgaggttttagagtactccaaaaatgttattggtgctcaa-- 460
Query: 1263 aggacgcaagagatgtataaaatgtcgccgttttttctgtttcatgtgcaaggtcccttg 1322
||| ||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 459 -------aagcaatgtataaaatgtcgtggttttttctgtttcatctgcaaggtcccttg 407
Query: 1323 gcattttgatatgtcatgttataggtacaaaatgttgaatcctaaccctccagctgaaga 1382
|||| || |||| ||||| || || |||| |||||||||||||||||||||||||||
Sbjct: 406 gcataatggtatgacatgtcatgcttataaaaagttgaatcctaaccctccagctgaaga 347
Query: 1383 cctgaagctgaagtctctggcaacaagtagtttttggcggcagtgtgtgaaatgtaacca 1442
||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||
Sbjct: 346 cctgaagctgaagtctctggcaacaaggagtctttggcggcagtgtgtgaagtgtaacca 287
Query: 1443 tatgattgaacttgctgaaggttgctatcacataacttgcagatgcggtaatgaattttg 1502
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 286 tatgattgaacttgctgaaggttgctatcacatgacttgcagatgcggttatgaattttg 227
Query: 1503 ctatcagtgtggagctgagtggaaggacaaaaaagcaacatgtgattgtccactttgggc 1562
||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 226 ctatcagtgcggagctgggtggaaggacaaaaaagcaacatgttcttgtccactttgggc 167
Query: 1563 c 1563
|
Sbjct: 166 c 166