Miyakogusa Predicted Gene
- Lj3g3v2298670.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2298670.1 tr|D8LRR1|D8LRR1_ECTSI Proteasome subunit beta
type OS=Ectocarpus siliculosus GN=Psb4 PE=3
SV=1,47.96,5e-19,PROTEASOME_B_2,Proteasome B-type subunit; PROTEASOME
SUBUNIT BETA TYPE 4,NULL; PROTEASOME SUBUNIT AL,CUFF.44276.1
(294 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71377 similar to UniRef100_A7NZG0 Cluster: Chromosome... 583 e-166
gnl|LJGI|TC59759 similar to UniRef100_A7NZG0 Cluster: Chromosome... 357 2e-98
gnl|LJGI|TC57370 similar to UniRef100_A7NZG0 Cluster: Chromosome... 214 2e-55
gnl|LJGI|TC75845 similar to UniRef100_A7NZG0 Cluster: Chromosome... 165 2e-40
gnl|LJGI|AV773931 similar to UniRef100_Q7DLR9 Cluster: Proteasom... 147 4e-35
gnl|LJGI|BP077944 similar to UniRef100_A7NZG0 Cluster: Chromosom... 103 6e-22
>gnl|LJGI|TC71377 similar to UniRef100_A7NZG0 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (91%)
Length = 1088
Score = 583 bits (294), Expect = e-166
Identities = 294/294 (100%)
Strand = Plus / Plus
Query: 1 atgattggagttaattttgaagacaatcatatagccactgggctgggaaatcatcttgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 atgattggagttaattttgaagacaatcatatagccactgggctgggaaatcatcttgct 592
Query: 61 agaccaattctccgtgatgagtggcatgaaaatttgacctttgaagaaggtgtcaagttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 agaccaattctccgtgatgagtggcatgaaaatttgacctttgaagaaggtgtcaagttg 652
Query: 121 ctggaaaaatgcatgcgtgtgttattatatcgtgatagatctgctgtcaacaagatacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 ctggaaaaatgcatgcgtgtgttattatatcgtgatagatctgctgtcaacaagatacag 712
Query: 181 attgctaaaatgactgaagaaggtgctactatgttccccccattctcgctgaagacatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 attgctaaaatgactgaagaaggtgctactatgttccccccattctcgctgaagacatac 772
Query: 241 tgggagttctctgctttcaggaatcctacattgggtgctgaaggatcgtggtag 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 tgggagttctctgctttcaggaatcctacattgggtgctgaaggatcgtggtag 826
>gnl|LJGI|TC59759 similar to UniRef100_A7NZG0 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (76%)
Length = 802
Score = 357 bits (180), Expect = 2e-98
Identities = 180/180 (100%)
Strand = Plus / Plus
Query: 1 atgattggagttaattttgaagacaatcatatagccactgggctgggaaatcatcttgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 atgattggagttaattttgaagacaatcatatagccactgggctgggaaatcatcttgct 527
Query: 61 agaccaattctccgtgatgagtggcatgaaaatttgacctttgaagaaggtgtcaagttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 agaccaattctccgtgatgagtggcatgaaaatttgacctttgaagaaggtgtcaagttg 587
Query: 121 ctggaaaaatgcatgcgtgtgttattatatcgtgatagatctgctgtcaacaagatacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 ctggaaaaatgcatgcgtgtgttattatatcgtgatagatctgctgtcaacaagatacag 647
>gnl|LJGI|TC57370 similar to UniRef100_A7NZG0 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (94%)
Length = 908
Score = 214 bits (108), Expect = 2e-55
Identities = 237/280 (84%)
Strand = Plus / Plus
Query: 15 ttttgaagacaatcatatagccactgggctgggaaatcatcttgctagaccaattctccg 74
|||||||||||| ||| | || || ||||| ||||||||||||||||| |||||||||||
Sbjct: 466 ttttgaagacaaccatgttgcaaccgggcttggaaatcatcttgctaggccaattctccg 525
Query: 75 tgatgagtggcatgaaaatttgacctttgaagaaggtgtcaagttgctggaaaaatgcat 134
|||||| ||||||||||| |||||||||||||||| ||||| ||| ||||||||||||||
Sbjct: 526 tgatgaatggcatgaaaacttgacctttgaagaagctgtcaggttactggaaaaatgcat 585
Query: 135 gcgtgtgttattatatcgtgatagatctgctgtcaacaagatacagattgctaaaatgac 194
||| ||| | || || || ||||| |||||||||||||| || ||||| ||||||| ||
Sbjct: 586 gcgcgtgcttttgtaccgcgataggtctgctgtcaacaaaattcagatatctaaaattac 645
Query: 195 tgaagaaggtgctactatgttccccccattctcgctgaagacatactgggagttctctgc 254
|||||||||| ||||| | | | | || || ||| |||| ||||||||||| ||||||||
Sbjct: 646 tgaagaaggttctactgtttacgcaccgttttcgttgaaaacatactgggacttctctgc 705
Query: 255 tttcaggaatcctacattgggtgctgaaggatcgtggtag 294
|||| |||||| ||| ||||||||||| || ||||||
Sbjct: 706 cttcaagaatccaacagcaggtgctgaaggttcatggtag 745
>gnl|LJGI|TC75845 similar to UniRef100_A7NZG0 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (79%)
Length = 837
Score = 165 bits (83), Expect = 2e-40
Identities = 140/159 (88%)
Strand = Plus / Plus
Query: 15 ttttgaagacaatcatatagccactgggctgggaaatcatcttgctagaccaattctccg 74
|||||||||||| ||| | || || ||||| ||||||||||||||||| |||||||||||
Sbjct: 519 ttttgaagacaaccatgttgcaaccgggcttggaaatcatcttgctaggccaattctccg 578
Query: 75 tgatgagtggcatgaaaatttgacctttgaagaaggtgtcaagttgctggaaaaatgcat 134
|||||| ||||||||||| |||||||||||||||| ||||| ||| ||||||||||||||
Sbjct: 579 tgatgaatggcatgaaaacttgacctttgaagaagctgtcaggttactggaaaaatgcat 638
Query: 135 gcgtgtgttattatatcgtgatagatctgctgtcaacaa 173
||| ||| | || || || ||||| ||||||||||||||
Sbjct: 639 gcgcgtgcttttgtaccgcgataggtctgctgtcaacaa 677
>gnl|LJGI|AV773931 similar to UniRef100_Q7DLR9 Cluster: Proteasome subunit beta type-4
precursor; n=1; Arabidopsis thaliana|Rep: Proteasome
subunit beta type-4 precursor - Arabidopsis thaliana
(Mouse-ear cress), partial (31%)
Length = 452
Score = 147 bits (74), Expect = 4e-35
Identities = 134/154 (87%)
Strand = Plus / Minus
Query: 15 ttttgaagacaatcatatagccactgggctgggaaatcatcttgctagaccaattctccg 74
|||||||||||| ||| | || || ||||| ||||||||||||||||| || ||||||||
Sbjct: 451 ttttgaagacaaccatgttgcaaccgggcttggaaatcatcttgctaggcccattctccg 392
Query: 75 tgatgagtggcatgaaaatttgacctttgaagaaggtgtcaagttgctggaaaaatgcat 134
|||||| ||||||||||| |||||||||||||||| ||||| ||| ||||||||||||||
Sbjct: 391 tgatgaatggcatgaaaacttgacctttgaagaagctgtcaggttactggaaaaatgcat 332
Query: 135 gcgtgtgttattatatcgtgatagatctgctgtc 168
||| ||| | || || || ||||| |||||||||
Sbjct: 331 gcgcgtgcttttgtaccgcgataggtctgctgtc 298
>gnl|LJGI|BP077944 similar to UniRef100_A7NZG0 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 388
Score = 103 bits (52), Expect = 6e-22
Identities = 151/184 (82%)
Strand = Plus / Minus
Query: 111 tgtcaagttgctggaaaaatgcatgcgtgtgttattatatcgtgatagatctgctgtcaa 170
||||| ||| ||||||||||||||||| ||| | || || || ||||| |||||||||||
Sbjct: 386 tgtcaggttactggaaaaatgcatgcgcgtgcttttgtaccgcgataggtctgctgtcaa 327
Query: 171 caagatacagattgctaaaatgactgaagaaggtgctactatgttccccccattctcgct 230
||| || ||||| ||||||| |||||||||||| ||||| | | | | || || ||| |
Sbjct: 326 caaaattcagatatctaaaattactgaagaaggttctactgtttacgcaccgttttcgtt 267
Query: 231 gaagacatactgggagttctctgctttcaggaatcctacattgggtgctgaaggatcgtg 290
||| ||||||||||| |||||||| |||| |||||| ||| ||||||||||| || ||
Sbjct: 266 gaaaacatactgggacttctctgccttcaagaatccaacagcaggtgctgaaggttcatg 207
Query: 291 gtag 294
||||
Sbjct: 206 gtag 203